RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 BTNL9Q6UXG8 535 aa28.08■■■□□ 2.09
LRFN4-202ENST00000393952 RRP36Q96EU6 259 aaKnown RBP28.08■■■□□ 2.09
LRFN4-202ENST00000393952 WDR33Q9C0J8 1336 aaKnown RBP28.08■■■□□ 2.09
LRFN4-202ENST00000393952 VCAM1P19320 739 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 SYDE2Q5VT97 1194 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 OPTNQ96CV9 577 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 SLC10A4Q96EP9 437 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 C12orf42Q96LP6 360 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 IRF6O14896 467 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 STAT2P52630 851 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 PPIL2Q13356 520 aa28.07■■■□□ 2.08
LRFN4-202ENST00000393952 RBM46Q8TBY0 533 aaKnown RBP28.07■■■□□ 2.08
LRFN4-202ENST00000393952 PASKQ96RG2 1323 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 ZSCAN22P10073 491 aaPredicted RBP28.06■■■□□ 2.08
LRFN4-202ENST00000393952 SH3D19Q5HYK7 790 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 SMC1BQ8NDV3 1235 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 FBXO18Q8NFZ0 1043 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 SHISA4Q96DD7 197 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 TMOD4Q9NZQ9 345 aa28.06■■■□□ 2.08
LRFN4-202ENST00000393952 YY1P25490 414 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 KRT40Q6A162 431 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 GPKOWQ92917 476 aaPredicted RBP eCLIP28.05■■■□□ 2.08
LRFN4-202ENST00000393952 MTMR8Q96EF0 704 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 RPAP3Q9H6T3 665 aaPredicted RBP28.05■■■□□ 2.08
LRFN4-202ENST00000393952 FBXO28Q9NVF7 368 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 VPS54Q9P1Q0 977 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 SEC63Q9UGP8 760 aaKnown RBP28.05■■■□□ 2.08
LRFN4-202ENST00000393952 FEM1BQ9UK73 627 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 PRR12Q9ULL5 1215 aa28.05■■■□□ 2.08
LRFN4-202ENST00000393952 PLA2G6O60733 806 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 PDIA4P13667 645 aaKnown RBP28.04■■■□□ 2.08
LRFN4-202ENST00000393952 GJA5P36382 358 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 TRIM29Q14134 588 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 CHURC1Q8WUH1 139 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 TANGO6Q9C0B7 1094 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 KCNH4Q9UQ05 1017 aa28.04■■■□□ 2.08
LRFN4-202ENST00000393952 CXCL11O14625 94 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 WWC2Q6AWC2 1192 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 FAM160B2Q86V87 743 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 LOC285556D6RIA3 1793 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 SNAP25P60880 206 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 SAMD1Q6SPF0 538 aaPredicted RBP28.03■■■□□ 2.08
LRFN4-202ENST00000393952 HEATR3Q7Z4Q2 680 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 KIFC2Q96AC6 838 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 KCNJ14Q9UNX9 436 aa28.03■■■□□ 2.08
LRFN4-202ENST00000393952 A0A0G2JLL6 359 aaPredicted RBP28.02■■■□□ 2.08
LRFN4-202ENST00000393952 PNMA6FA0A0J9YX94 578 aa28.02■■■□□ 2.08
LRFN4-202ENST00000393952 CDC37Q16543 378 aaPredicted RBP28.02■■■□□ 2.08
LRFN4-202ENST00000393952 PRRT2Q7Z6L0 340 aaPredicted RBP28.02■■■□□ 2.08
LRFN4-202ENST00000393952 FERMT3Q86UX7 667 aa28.02■■■□□ 2.08
LRFN4-202ENST00000393952 PARP14Q460N5 1801 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 ZBTB5O15062 677 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 PPP1R11O60927 126 aaPredicted RBP28.01■■■□□ 2.07
LRFN4-202ENST00000393952 F13A1P00488 732 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 XBP1P17861 261 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 QRICH1Q2TAL8 776 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 RGS22Q8NE09 1264 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 WNK4Q96J92 1243 aa28.01■■■□□ 2.07
LRFN4-202ENST00000393952 STXBP3O00186 592 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 TOMM70O94826 608 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 HUNKP57058 714 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 TYW1BQ6NUM6 668 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 ZNF784Q8NCA9 323 aaPredicted RBP28■■■□□ 2.07
LRFN4-202ENST00000393952 TNPO1Q92973 898 aaKnown RBP28■■■□□ 2.07
LRFN4-202ENST00000393952 SLF1Q9BQI6 1058 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 BARHL2Q9NY43 387 aa28■■■□□ 2.07
LRFN4-202ENST00000393952 FLOT1O75955 427 aa27.99■■■□□ 2.07
LRFN4-202ENST00000393952 MCTP1Q6DN14 999 aa27.99■■■□□ 2.07
LRFN4-202ENST00000393952 GADL1Q6ZQY3 521 aa27.99■■■□□ 2.07
LRFN4-202ENST00000393952 PHF20Q9BVI0 1012 aa27.99■■■□□ 2.07
LRFN4-202ENST00000393952 SH3GLB2Q9NR46 395 aa27.99■■■□□ 2.07
LRFN4-202ENST00000393952 RLFQ13129 1914 aa27.98■■■□□ 2.07
LRFN4-202ENST00000393952 MMP1P03956 469 aa27.98■■■□□ 2.07
LRFN4-202ENST00000393952 TREML2Q5T2D2 321 aa27.98■■■□□ 2.07
LRFN4-202ENST00000393952 PRPF38AQ8NAV1 312 aaKnown RBP27.98■■■□□ 2.07
LRFN4-202ENST00000393952 PROCA1Q8NCQ7 364 aaPredicted RBP27.98■■■□□ 2.07
LRFN4-202ENST00000393952 COA7Q96BR5 231 aa27.98■■■□□ 2.07
LRFN4-202ENST00000393952 RESTQ13127 1097 aa27.97■■■□□ 2.07
LRFN4-202ENST00000393952 CATSPERGQ6ZRH7 1159 aa27.97■■■□□ 2.07
LRFN4-202ENST00000393952 RANBP17Q9H2T7 1088 aaKnown RBP27.97■■■□□ 2.07
LRFN4-202ENST00000393952 PPP1R9AQ9ULJ8 1098 aa27.97■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L15C9J2P7 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L13C9JLJ4 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L11C9JVI0 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L18D6R9N7 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L22D6RA61 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L17D6RBQ6 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L19D6RCP7 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L20D6RJB6 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 hCG_1984214I3L0E3 225 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 NAPAP54920 295 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 NLRP5P59047 1200 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 KIF23Q02241 960 aaPredicted RBP27.96■■■□□ 2.07
LRFN4-202ENST00000393952 USP17L24Q0WX57 530 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 MKRN3Q13064 507 aaKnown RBP27.96■■■□□ 2.07
LRFN4-202ENST00000393952 SNAPC2Q13487 334 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 MOGSQ13724 837 aa27.96■■■□□ 2.07
LRFN4-202ENST00000393952 ZNF713Q8N859 430 aaPredicted RBP27.96■■■□□ 2.07
LRFN4-202ENST00000393952 KIF28PB7ZC32 967 aa27.95■■■□□ 2.07
LRFN4-202ENST00000393952 CCDC174Q6PII3 467 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms