RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 DHX38Q92620 1227 aaKnown RBP3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 RCC1LQ96I51 464 aaKnown RBP3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 MKRN2Q9H000 416 aaKnown RBP3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 ADAMTS10Q9H324 1103 aa3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 SUSD2Q9UGT4 822 aa3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 ADAMTS20P59510 1910 aa3.83□□□□□ -1.8
RNU6-541P-201ENST00000384709 FITM1A5D6W6 292 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZNF503-AS2A6NEH8 195 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 GLI1P08151 1106 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 LTKP29376 864 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 PCBP3P57721 371 aaKnown RBP3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 CHMP4BP1P59074 171 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZNF445P59923 1031 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZC3H6P61129 1189 aaKnown RBP3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 SLC7A5Q01650 507 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ARID5AQ03989 594 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 CHRNEQ04844 493 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 DUSP4Q13115 394 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 SNX17Q15036 470 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 CLEC16AQ2KHT3 1053 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 TNNI3KQ59H18 835 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 RTP2Q5QGT7 225 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 FBXW10Q5XX13 1052 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 DCAF15Q66K64 600 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZSWIM9Q86XI8 627 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 CCDC144CPQ8IYA2 1237 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 SHISA4Q96DD7 197 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 FOXP3Q9BZS1 431 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 GFOD1Q9NXC2 390 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 SLAMF8Q9P0V8 285 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 WHRNQ9P202 907 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 TCFL5Q9UL49 500 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 DIS3Q9Y2L1 958 aaKnown RBP3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZNF451Q9Y4E5 1061 aa3.82□□□□□ -1.8
RNU6-541P-201ENST00000384709 FADS2P1A8MWK0 482 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 NRDCO43847 1150 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 CAPNS1P04632 268 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 VAV1P15498 845 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 FYB2Q5VWT5 728 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 TDRD10Q5VZ19 366 aaKnown RBP3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 SPPL2CQ8IUH8 684 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 ARHGEF39Q8N4T4 335 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 OXR1Q8N573 874 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 TMEM52Q8NDY8 209 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 FAM168AQ92567 244 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 KIRREL1Q96J84 757 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 MAP6Q96JE9 813 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 FCRL2Q96LA5 508 aaPredicted RBP3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 HAUS7Q99871 368 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 FAM53CQ9NYF3 392 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 FBXL21Q9UKT6 434 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 MINPP1Q9UNW1 487 aa3.81□□□□□ -1.8
RNU6-541P-201ENST00000384709 SMAD7O15105 426 aaKnown RBP3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 KLF4O43474 513 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 SYPP08247 313 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ITGA4P13612 1032 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ETFBP38117 255 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ERVFC1P60507 584 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 MESP2Q0VG99 397 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 GRB10Q13322 594 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 NCAPHQ15003 741 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 TCEAL1Q15170 157 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 GNPTABQ3T906 1256 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 NLRX1Q86UT6 975 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 BHLHE22Q8NFJ8 381 aaPredicted RBP3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ABHD4Q8TB40 342 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 CPLX3Q8WVH0 158 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 SLC12A9Q9BXP2 914 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ZNF408Q9H9D4 720 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 CWC22Q9HCG8 908 aaKnown RBP3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 TNFRSF10DQ9UBN6 386 aa3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 SF3B6Q9Y3B4 125 aaKnown RBP3.8□□□□□ -1.8
RNU6-541P-201ENST00000384709 ANKRD34BA5PLL1 514 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 H0Y8X5 98 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 FGF10O15520 208 aaPredicted RBP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 TP53P04637 393 aaPredicted RBP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 SSBP05455 408 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 EPHX1P07099 455 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 RAC2P15153 192 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 NOP2P46087 812 aaKnown RBP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 KCNMB1Q16558 191 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 NAALADL2Q58DX5 795 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 RCSD1Q6JBY9 416 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 VHLLQ6RSH7 139 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 CRTC3Q6UUV7 619 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 SLCO6A1Q86UG4 719 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 IRF2BP1Q8IU81 584 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 NLGN2Q8NFZ4 835 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 MYLIPQ8WY64 445 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 ARMC5Q96C12 935 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 HHIPL1Q96JK4 782 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 FCRL3Q96P31 734 aaPredicted RBP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 CRTAC1Q9NQ79 661 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 ERVK13-1Q9NX77 482 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 ACTR10Q9NZ32 417 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 ACSL6Q9UKU0 697 aa3.79□□□□□ -1.8
RNU6-541P-201ENST00000384709 YBX2Q9Y2T7 364 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms