RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ZNF792Q3KQV3 632 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 ERMP1Q7Z2K6 904 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 PI4K2BQ8TCG2 481 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 ACSF2Q96CM8 615 aaPredicted RBP4.79□□□□□ -1.64
SMC6-202ENST00000381272 CORINQ9Y5Q5 1042 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 MROH1Q8NDA8 1641 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 MAP3K4Q9Y6R4 1608 aa4.79□□□□□ -1.64
SMC6-202ENST00000381272 VWDEQ8N2E2 1590 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 ARAP3Q8WWN8 1544 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 ERVK-7P63135 1459 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 EIF3AQ14152 1382 aaKnown RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 BTBD11A6QL63 1104 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 PRR33A8MZF0 331 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 ZNF16P17020 682 aaPredicted RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 ETV3P41162 512 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 TNNT2P45379 298 aaPredicted RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 YARSP54577 528 aaKnown RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 MFAP1P55081 439 aaKnown RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 IKZF1Q13422 519 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 CDH24Q86UP0 819 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 LAS1LQ9Y4W2 734 aaKnown RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 IFT172Q9UG01 1749 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 PIK3C2GO75747 1445 aa4.78□□□□□ -1.64
SMC6-202ENST00000381272 PPRC1Q5VV67 1664 aaKnown RBP4.78□□□□□ -1.64
SMC6-202ENST00000381272 PITPNM2Q9BZ72 1349 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 CNTNAP4Q9C0A0 1308 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 BCAR3O75815 825 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 CBX7O95931 251 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 JUNBP17275 347 aaPredicted RBP4.77□□□□□ -1.65
SMC6-202ENST00000381272 KIR3DL1P43629 444 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 MPP2Q14168 576 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 TMEM201Q5SNT2 666 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 CDKAL1Q5VV42 579 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 TMEM132EQ6IEE7 984 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 FAM196AQ6ZSG2 479 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 COPRSQ9NQ92 184 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 GGT7Q9UJ14 662 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 NOS1P29475 1434 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 ASXL2Q76L83 1435 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 ROBO2Q9HCK4 1378 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 KDM2BQ8NHM5 1336 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 PRR36Q9H6K5 1346 aa4.77□□□□□ -1.65
SMC6-202ENST00000381272 BIN1O00499 593 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 ITGB5P18084 799 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 EIF4A3P38919 411 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 GGT6Q6P531 493 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 FBXL19Q6PCT2 694 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 SLC23A3Q6PIS1 610 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 REC114Q7Z4M0 266 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 TRMT2AQ8IZ69 625 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 FAM13CQ8NE31 585 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 ZNF428Q96B54 188 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 HSPA12BQ96MM6 686 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 SLC12A5Q9H2X9 1139 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 RC3H2Q9HBD1 1191 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 CEP131Q9UPN4 1083 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 RNF114Q9Y508 228 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 CAPN6Q9Y6Q1 641 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 NPC1L1Q9UHC9 1359 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 EFCAB6Q5THR3 1501 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 MYOM2P54296 1465 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 UPK3BL1B0FP48 263 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 UPK3BL2E5RIL1 263 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 GRIN3BO60391 1043 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 HTR3BO95264 441 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 RNASE1P07998 156 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 GARTP22102 1010 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 ZP2Q05996 745 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 CWF19L2Q2TBE0 894 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 CENPQQ7L2Z9 268 aaPredicted RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 MORC1Q86VD1 984 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 SLFN12Q8IYM2 578 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 CYB5D2Q8WUJ1 264 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 ASIC4Q96FT7 647 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 KCNQ5Q9NR82 932 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 MBNL3Q9NUK0 354 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 REV1Q9UBZ9 1251 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 ADAMTS6Q9UKP5 1117 aa4.76□□□□□ -1.65
SMC6-202ENST00000381272 RRP7AQ9Y3A4 280 aaKnown RBP4.76□□□□□ -1.65
SMC6-202ENST00000381272 CENPJQ9HC77 1338 aaPredicted RBP4.75□□□□□ -1.65
SMC6-202ENST00000381272 TXKP42681 527 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 RGS3P49796 1198 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 MLECQ14165 292 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 ATG4DQ86TL0 474 aaPredicted RBP4.75□□□□□ -1.65
SMC6-202ENST00000381272 TMEM87AQ8NBN3 555 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 DNAJB8Q8NHS0 232 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 FBXO27Q8NI29 283 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 PIWIL2Q8TC59 973 aaKnown RBP4.75□□□□□ -1.65
SMC6-202ENST00000381272 NEURL4Q96JN8 1562 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 FMNL2Q96PY5 1086 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 NSD3Q9BZ95 1437 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 SEMA3GQ9NS98 782 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 LMCD1Q9NZU5 365 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 KLHL3Q9UH77 587 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 POLR3KQ9Y2Y1 108 aaPredicted RBP4.75□□□□□ -1.65
SMC6-202ENST00000381272 CCDC9Q9Y3X0 531 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms