RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PLCG2P16885 1265 aa19.8■□□□□ 0.76
TRAF3IP1-201ENST00000373327 NFIXQ14938 502 aa19.8■□□□□ 0.76
TRAF3IP1-201ENST00000373327 CYP26C1Q6V0L0 522 aa19.8■□□□□ 0.76
TRAF3IP1-201ENST00000373327 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
TRAF3IP1-201ENST00000373327 LTN1O94822 1766 aa19.8■□□□□ 0.76
TRAF3IP1-201ENST00000373327 CYP27A1Q02318 531 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 HERC4Q5GLZ8 1057 aaPredicted RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 SMAP1Q8IYB5 467 aaPredicted RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 ENOX1Q8TC92 643 aaKnown RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 LUC7LQ9NQ29 371 aaKnown RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 ALX1Q15699 326 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 C2CD5Q86YS7 1000 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 SLC1A4P43007 532 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 RAPGEF1Q13905 1077 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 UBE2SQ16763 222 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 SPICE1Q8N0Z3 855 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 GTPBP6O43824 516 aaPredicted RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 TRIM37O94972 964 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 TOB1P50616 345 aaPredicted RBP19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 KMT5BQ4FZB7 885 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 TBCKQ8TEA7 893 aa19.79■□□□□ 0.76
TRAF3IP1-201ENST00000373327 ADCY7P51828 1080 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 SYCP1Q15431 976 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 RASGRP2Q7LDG7 609 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 WDR24Q96S15 920 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 EARS2Q5JPH6 523 aaKnown RBP19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 FOXP4Q8IVH2 680 aaPredicted RBP19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 FNBP4Q8N3X1 1017 aaPredicted RBP19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 NSUN4Q96CB9 384 aaKnown RBP19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 GSDMAQ96QA5 445 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 DBNDD1Q9H9R9 158 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 NFAT5O94916 1531 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 STX10O60499 249 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 FGFR1OPO95684 399 aaKnown RBP19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 GYS2P54840 703 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 PTPAQ15257 358 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 KRT31Q15323 416 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 RRAGAQ7L523 313 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 PTF1AQ7RTS3 328 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 CEP112Q8N8E3 955 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 CUL5Q93034 780 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 FAM107BQ9H098 131 aa19.78■□□□□ 0.76
TRAF3IP1-201ENST00000373327 OR52Z1P0C646 297 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 NEK11Q8NG66 645 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 JAKMIP2Q96AA8 810 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 NCAPH2Q6IBW4 605 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 BCCIPQ9P287 314 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 SPDYE3A6NKU9 549 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 CLCN6P51797 869 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 TMTC1Q8IUR5 882 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 OSBPL5Q9H0X9 879 aaPredicted RBP19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 PCDHA4Q9UN74 947 aa19.77■□□□□ 0.76
TRAF3IP1-201ENST00000373327 BICDL2A1A5D9 508 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SP4Q02446 784 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CYP4A11Q02928 519 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NTRK3Q16288 839 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 KRT25Q7Z3Z0 450 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NEK8Q86SG6 692 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TRIML1Q8N9V2 468 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 GBP3Q9H0R5 595 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TMEM260Q9NX78 707 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SERPINB2P05120 415 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PLCG1P19174 1290 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TMEM47Q9BQJ4 181 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NWD1Q149M9 1564 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 OR8K1Q8NGG5 319 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 ALS2CR12Q96Q35 445 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 DDX39AO00148 427 aaKnown RBP19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TBCAO75347 108 aaKnown RBP19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 ODF2Q5BJF6 829 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SYCP3Q8IZU3 236 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 IFT81Q8WYA0 676 aa19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 FAM217BQ9NTX9 383 aaPredicted RBP19.76■□□□□ 0.75
TRAF3IP1-201ENST00000373327 VEGFAP15692 232 aaPredicted RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 OAS2P29728 719 aaKnown RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 KRT83P78385 493 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 RBM43Q6ZSC3 357 aaKnown RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 GJA10Q969M2 543 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 BRIP1Q9BX63 1249 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 ERCC5P28715 1186 aaPredicted RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CDK8P49336 464 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MRPL12P52815 198 aaKnown RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 UBXN2AP68543 259 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 ZCCHC17Q9NP64 241 aaKnown RBP19.75■□□□□ 0.75
TRAF3IP1-201ENST00000373327 FOXP2O15409 715 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TUBGCP2Q9BSJ2 902 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TACC1O75410 805 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PRCPP42785 496 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TBC1D10BQ4KMP7 808 aaPredicted RBP19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NBPF11Q86T75 865 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TFR2Q9UP52 801 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 EPN1Q9Y6I3 576 aaPredicted RBP19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 FMN2Q9NZ56 1722 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 XDHP47989 1333 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TCRBV5S4A2TA0A5A2 114 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 USP17L5A8MUK1 530 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CAPN2P17655 700 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MXD3Q9BW11 206 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms