RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 COPB2P35606 906 aa21.34■■□□□ 1.01
TRAPPC3-202ENST00000373162 FXR1P51114 621 aaKnown RBP eCLIP21.34■■□□□ 1.01
TRAPPC3-202ENST00000373162 ZNF792Q3KQV3 632 aa21.34■■□□□ 1.01
TRAPPC3-202ENST00000373162 TEX13BQ9BXU2 312 aa21.34■■□□□ 1.01
TRAPPC3-202ENST00000373162 DNAJC25-GNG10A0A024R161 153 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 PLA2G6O60733 806 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 FCER1AP12319 257 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 SLFN13Q68D06 897 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 DPP9Q86TI2 863 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 RILPL2Q969X0 211 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 DDX20Q9UHI6 824 aaKnown RBP21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 FEM1BQ9UK73 627 aa21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 COLQQ9Y215 455 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 DIS3Q9Y2L1 958 aaKnown RBP21.33■■□□□ 1.01
TRAPPC3-202ENST00000373162 RAD21O60216 631 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 BMP3P12645 472 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 GSPT1P15170 499 aaKnown RBP21.32■■□□□ 1
TRAPPC3-202ENST00000373162 SAMD1Q6SPF0 538 aaPredicted RBP21.32■■□□□ 1
TRAPPC3-202ENST00000373162 TBC1D10CQ8IV04 446 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 DPF3Q92784 378 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 IL25Q9H293 177 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 TCP11L1Q9NUJ3 509 aa21.32■■□□□ 1
TRAPPC3-202ENST00000373162 ZNF536O15090 1300 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 TSPY2A6NKD2 308 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 OAZ1P54368 228 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 SNRNP48Q6IEG0 339 aaKnown RBP21.31■■□□□ 1
TRAPPC3-202ENST00000373162 RCSD1Q6JBY9 416 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 STAG1Q8WVM7 1258 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 FGD4Q96M96 766 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 MMP19Q99542 508 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 C11orf49Q9H6J7 331 aa21.31■■□□□ 1
TRAPPC3-202ENST00000373162 MSCO60682 206 aa21.3■■□□□ 1
TRAPPC3-202ENST00000373162 PGK2P07205 417 aa21.3■■□□□ 1
TRAPPC3-202ENST00000373162 LAMA3Q16787 3333 aa21.3■■□□□ 1
TRAPPC3-202ENST00000373162 SEPT4O43236 478 aa21.29■■□□□ 1
TRAPPC3-202ENST00000373162 PCP11498 1178 aaKnown RBP21.29■■□□□ 1
TRAPPC3-202ENST00000373162 SLC5A4Q9NY91 659 aa21.29■■□□□ 1
TRAPPC3-202ENST00000373162 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
TRAPPC3-202ENST00000373162 STX8Q9UNK0 236 aa21.29■■□□□ 1
TRAPPC3-202ENST00000373162 LCTP09848 1927 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 TMEM232C9JQI7 657 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 RANBP6O60518 1105 aaKnown RBP21.28■■□□□ 1
TRAPPC3-202ENST00000373162 FDX1P10109 184 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 HAND2P61296 217 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 IRX6P78412 446 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-202ENST00000373162 KCTD2Q14681 263 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 AKNAD1Q5T1N1 836 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 TTC22Q5TAA0 569 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 FAM160B2Q86V87 743 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 KIFC2Q96AC6 838 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 RAVER2Q9HCJ3 691 aaKnown RBP21.28■■□□□ 1
TRAPPC3-202ENST00000373162 NR2E3Q9Y5X4 410 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 NEDD4P46934 1319 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 SMCHD1A6NHR9 2005 aa21.28■■□□□ 1
TRAPPC3-202ENST00000373162 LRRC37A2A6NM11 1700 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 EVI5O60447 810 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 ZBED4O75132 1171 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 MCCP23508 829 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 STAT2P52630 851 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 PRAMEF19Q5SWL8 479 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 CWC27Q6UX04 472 aaKnown RBP21.27■■□□□ 1
TRAPPC3-202ENST00000373162 MAMDC4Q6UXC1 1216 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 BTNL9Q6UXG8 535 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 TINF2Q9BSI4 451 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 DSCC1Q9BVC3 393 aa21.27■■□□□ 1
TRAPPC3-202ENST00000373162 HIP1O00291 1037 aa21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 ZNF865P0CJ78 1059 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 SLC1A4P43007 532 aa21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 MFAP1P55081 439 aaKnown RBP21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 CPXCR1Q8N123 301 aa21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
TRAPPC3-202ENST00000373162 DNM1LO00429 736 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 SNHG28P0DPA3 235 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 TAL1P17542 331 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 LRRC26Q2I0M4 334 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 KCTD1Q719H9 257 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 ZNF467Q7Z7K2 595 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 MSL3Q8N5Y2 521 aaKnown RBP21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 CHST13Q8NET6 341 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 CHURC1Q8WUH1 139 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 DCAF4Q8WV16 495 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 DIAPH3Q9NSV4 1193 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 RBM27Q9P2N5 1060 aaKnown RBP21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 PRR12Q9ULL5 1215 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 MCM3APO60318 1980 aa21.25■□□□□ 0.99
TRAPPC3-202ENST00000373162 DNAH12Q6ZR08 3092 aa21.24■□□□□ 0.99
TRAPPC3-202ENST00000373162 SNAI1O95863 264 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-202ENST00000373162 TOP1P11387 765 aaKnown RBP21.24■□□□□ 0.99
TRAPPC3-202ENST00000373162 GDF15Q99988 308 aa21.24■□□□□ 0.99
TRAPPC3-202ENST00000373162 SYNGAP1Q96PV0 1343 aa21.24■□□□□ 0.99
TRAPPC3-202ENST00000373162 CNGA1P29973 690 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 NT5C2P49902 561 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 AGBL1Q96MI9 1066 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 TTC14Q96N46 770 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 KATNBL1Q9H079 304 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 FBXO40Q9UH90 709 aa21.23■□□□□ 0.99
TRAPPC3-202ENST00000373162 PDHBP11177 359 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms