RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 XPO4Q9C0E2 1151 aaKnown RBP20.35■□□□□ 0.85
CTSA-204ENST00000372484 MPHOSPH10O00566 681 aaKnown RBP20.34■□□□□ 0.85
CTSA-204ENST00000372484 CACNB3P54284 484 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 HDLBPQ00341 1268 aaKnown RBP20.34■□□□□ 0.85
CTSA-204ENST00000372484 TCP10Q12799 353 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 MORC3Q14149 939 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 ASPRV1Q53RT3 343 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 DNTTIP2Q5QJE6 756 aaKnown RBP20.34■□□□□ 0.85
CTSA-204ENST00000372484 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 ZFPM1Q8IX07 1006 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 C4orf32Q8N8J7 132 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 MLKLQ8NB16 471 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 SPATA20Q8TB22 786 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 CACTINQ8WUQ7 758 aaKnown RBP20.34■□□□□ 0.85
CTSA-204ENST00000372484 PAGE5Q96GU1 130 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 RIOX1Q9H6W3 641 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 C6orf50Q9HD87 102 aa20.34■□□□□ 0.85
CTSA-204ENST00000372484 ZNF646O15015 1829 aaPredicted RBP20.33■□□□□ 0.85
CTSA-204ENST00000372484 SMCO2A6NFE2 343 aa20.33■□□□□ 0.85
CTSA-204ENST00000372484 GNA11P29992 359 aa20.33■□□□□ 0.85
CTSA-204ENST00000372484 SOGA3Q5TF21 947 aa20.33■□□□□ 0.85
CTSA-204ENST00000372484 EHD4Q9H223 541 aa20.33■□□□□ 0.85
CTSA-204ENST00000372484 DACH1Q9UI36 760 aa20.33■□□□□ 0.85
CTSA-204ENST00000372484 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.85
CTSA-204ENST00000372484 SH3RF1Q7Z6J0 888 aa20.33■□□□□ 0.84
CTSA-204ENST00000372484 DHX36Q9H2U1 1008 aaKnown RBP20.33■□□□□ 0.84
CTSA-204ENST00000372484 MYH4Q9Y623 1939 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 ATP1A3P13637 1013 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 LONP1P36776 959 aaKnown RBP20.32■□□□□ 0.84
CTSA-204ENST00000372484 FANCCQ00597 558 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 LRRC8AQ8IWT6 810 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 IQUBQ8NA54 791 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 PYM1Q9BRP8 204 aaKnown RBP20.32■□□□□ 0.84
CTSA-204ENST00000372484 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 KRT25Q7Z3Z0 450 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 SERPINA10Q9UK55 444 aa20.32■□□□□ 0.84
CTSA-204ENST00000372484 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 ATP2B2Q01814 1243 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 SUPT20HQ8NEM7 779 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 CCDC17Q96LX7 622 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 IDI2Q9BXS1 227 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 GPCPD1Q9NPB8 672 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
CTSA-204ENST00000372484 GREB1LQ9C091 1923 aaPredicted RBP20.31■□□□□ 0.84
CTSA-204ENST00000372484 C21orf2O43822 256 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 NEMFO60524 1076 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 TXLNAP40222 546 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 ARID5BQ14865 1188 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 E2F4Q16254 413 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 DTHD1Q6ZMT9 781 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 ZSCAN29Q8IWY8 852 aaPredicted RBP20.3■□□□□ 0.84
CTSA-204ENST00000372484 IMPACTQ9P2X3 320 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 FAM198AQ9UFP1 575 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 MYO1BO43795 1136 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 SERPINC1P01008 464 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 NONOQ15233 471 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTSA-204ENST00000372484 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
CTSA-204ENST00000372484 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 PI4KBQ9UBF8 816 aa20.3■□□□□ 0.84
CTSA-204ENST00000372484 SIPA1L1O43166 1804 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 DDTLA6NHG4 134 aaPredicted RBP20.29■□□□□ 0.84
CTSA-204ENST00000372484 CASP1P29466 404 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 GSDMDP57764 484 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 DPYDQ12882 1025 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 GSDMAQ96QA5 445 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
CTSA-204ENST00000372484 TMEM60Q9H2L4 133 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 ESYT2A0FGR8 921 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 LAD1O00515 517 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 CDC25AP30304 524 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 UBASH3AP57075 661 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 PPP4R3BQ5MIZ7 849 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 TMC6Q7Z403 805 aa20.29■□□□□ 0.84
CTSA-204ENST00000372484 REXO1Q8N1G1 1221 aaKnown RBP20.29■□□□□ 0.84
CTSA-204ENST00000372484 FAM196BA6NMK8 535 aa20.28■□□□□ 0.84
CTSA-204ENST00000372484 FMR1Q06787 632 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTSA-204ENST00000372484 STAMQ92783 540 aa20.28■□□□□ 0.84
CTSA-204ENST00000372484 TRIM34Q9BYJ4 488 aa20.28■□□□□ 0.84
CTSA-204ENST00000372484 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 CCNT1O60563 726 aaKnown RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 PDXDC2PQ6P474 469 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 NFE2L3Q9Y4A8 694 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 TERF1P54274 439 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
CTSA-204ENST00000372484 SH3BP5LQ7L8J4 393 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 NEK8Q86SG6 692 aa20.27■□□□□ 0.84
CTSA-204ENST00000372484 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms