RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SPDYE6P0CI01 402 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 ATP2B2Q01814 1243 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 ZNF543Q08ER8 600 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 PTGDRQ13258 359 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 C6orf50Q9HD87 102 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 MYH4Q9Y623 1939 aa28.52■■■□□ 2.16
CTSA-203ENST00000372459 GNA11P29992 359 aa28.51■■■□□ 2.16
CTSA-203ENST00000372459 KANSL2Q9H9L4 492 aa28.51■■■□□ 2.16
CTSA-203ENST00000372459 TUBE1Q9UJT0 475 aa28.51■■■□□ 2.16
CTSA-203ENST00000372459 NLRP12P59046 1061 aa28.51■■■□□ 2.15
CTSA-203ENST00000372459 DLGAP5Q15398 846 aa28.51■■■□□ 2.15
CTSA-203ENST00000372459 GPATCH4Q5T3I0 446 aaKnown RBP28.51■■■□□ 2.15
CTSA-203ENST00000372459 RASGRP4Q8TDF6 673 aa28.51■■■□□ 2.15
CTSA-203ENST00000372459 A0A087WWV3 80 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 BECN2A8MW95 431 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 POLR2DO15514 142 aaKnown RBP28.5■■■□□ 2.15
CTSA-203ENST00000372459 MCM7P33993 719 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 DALRD3Q5D0E6 543 aaKnown RBP28.5■■■□□ 2.15
CTSA-203ENST00000372459 GPCPD1Q9NPB8 672 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 NYAP2Q9P242 653 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 ZNF500O60304 480 aaPredicted RBP28.5■■■□□ 2.15
CTSA-203ENST00000372459 MKL1Q969V6 931 aa28.5■■■□□ 2.15
CTSA-203ENST00000372459 SMCO2A6NFE2 343 aa28.49■■■□□ 2.15
CTSA-203ENST00000372459 TMEM179Q6ZVK1 233 aa28.49■■■□□ 2.15
CTSA-203ENST00000372459 AGBL3Q8NEM8 1001 aa28.49■■■□□ 2.15
CTSA-203ENST00000372459 PNOCQ13519 176 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 KANK3Q6NY19 840 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 ZBTB12Q9Y330 459 aaPredicted RBP28.48■■■□□ 2.15
CTSA-203ENST00000372459 ESYT2A0FGR8 921 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 OFD1O75665 1012 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 DPCR1Q3MIW9 517 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 ARL6IP4Q66PJ3 421 aaKnown RBP28.48■■■□□ 2.15
CTSA-203ENST00000372459 CSRNP1Q96S65 589 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 BPIFA3Q9BQP9 254 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 ZKSCAN5Q9Y2L8 839 aa28.48■■■□□ 2.15
CTSA-203ENST00000372459 BIN1O00499 593 aa28.47■■■□□ 2.15
CTSA-203ENST00000372459 EEF2P13639 858 aaKnown RBP28.47■■■□□ 2.15
CTSA-203ENST00000372459 CCDC96Q2M329 555 aa28.47■■■□□ 2.15
CTSA-203ENST00000372459 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.47■■■□□ 2.15
CTSA-203ENST00000372459 USP49Q70CQ1 688 aa28.47■■■□□ 2.15
CTSA-203ENST00000372459 KRT25Q7Z3Z0 450 aa28.47■■■□□ 2.15
CTSA-203ENST00000372459 DHX40Q8IX18 779 aaKnown RBP28.47■■■□□ 2.15
CTSA-203ENST00000372459 ZNF70Q9UC06 446 aaPredicted RBP28.47■■■□□ 2.15
CTSA-203ENST00000372459 SERTAD1Q9UHV2 236 aa28.47■■■□□ 2.15
CTSA-203ENST00000372459 VWA3AA6NCI4 1184 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 ABCB5Q2M3G0 1257 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 SYMPKQ92797 1274 aaKnown RBP28.46■■■□□ 2.15
CTSA-203ENST00000372459 CCDC34Q96HJ3 373 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.46■■■□□ 2.15
CTSA-203ENST00000372459 GOLGB1Q14789 3259 aaKnown RBP28.46■■■□□ 2.15
CTSA-203ENST00000372459 TCP10L2B9ZVM9 353 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 MDM2Q00987 491 aaPredicted RBP28.46■■■□□ 2.15
CTSA-203ENST00000372459 ADGRF4Q8IZF3 695 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 PDILTQ8N807 584 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 EPSTI1Q96J88 318 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 TAOK3Q9H2K8 898 aa28.46■■■□□ 2.15
CTSA-203ENST00000372459 ICA1Q05084 483 aa28.45■■■□□ 2.14
CTSA-203ENST00000372459 SEPT2Q15019 361 aa28.45■■■□□ 2.14
CTSA-203ENST00000372459 INF2Q27J81 1249 aa28.45■■■□□ 2.14
CTSA-203ENST00000372459 HERC5Q9UII4 1024 aaKnown RBP28.45■■■□□ 2.14
CTSA-203ENST00000372459 PNMA6FA0A0J9YX94 578 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 CLRN2A0PK11 232 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 POSTNQ15063 836 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 DCAF4Q8WV16 495 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 FAM151AQ8WW52 585 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 JMJD4Q9H9V9 463 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 ACTN4O43707 911 aaKnown RBP28.44■■■□□ 2.14
CTSA-203ENST00000372459 GDF11O95390 407 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 TPM2P07951 284 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 NONOQ15233 471 aaKnown RBP eCLIP28.44■■■□□ 2.14
CTSA-203ENST00000372459 SHROOM1Q2M3G4 852 aaPredicted RBP28.44■■■□□ 2.14
CTSA-203ENST00000372459 SPDYE2Q495Y8 402 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 RBM26Q5T8P6 1007 aaKnown RBP28.44■■■□□ 2.14
CTSA-203ENST00000372459 AOPEPQ8N6M6 819 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 C4orf32Q8N8J7 132 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 MTMR14Q8NCE2 650 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 TRIM5Q9C035 493 aa28.44■■■□□ 2.14
CTSA-203ENST00000372459 TTBK2Q6IQ55 1244 aa28.43■■■□□ 2.14
CTSA-203ENST00000372459 KCTD1Q719H9 257 aa28.43■■■□□ 2.14
CTSA-203ENST00000372459 PCDHA5Q9Y5H7 936 aa28.43■■■□□ 2.14
CTSA-203ENST00000372459 BRCA1P38398 1863 aaKnown RBP28.42■■■□□ 2.14
CTSA-203ENST00000372459 CXCL9Q07325 125 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 PPP1R18Q6NYC8 613 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 SARM1Q6SZW1 724 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 JDP2Q8WYK2 163 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 PPP1R1BQ9UD71 204 aaPredicted RBP28.42■■■□□ 2.14
CTSA-203ENST00000372459 SLC1A4P43007 532 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 SLFN13Q68D06 897 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 PLA2G4DQ86XP0 818 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 REXO1Q8N1G1 1221 aaKnown RBP28.42■■■□□ 2.14
CTSA-203ENST00000372459 DHX58Q96C10 678 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.42■■■□□ 2.14
CTSA-203ENST00000372459 FER1L6Q2WGJ9 1857 aa28.42■■■□□ 2.14
CTSA-203ENST00000372459 FOXN1O15353 648 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 LONP1P36776 959 aaKnown RBP28.41■■■□□ 2.14
CTSA-203ENST00000372459 FKBP1CQ5VVH2 108 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 COA7Q96BR5 231 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 PYM1Q9BRP8 204 aaKnown RBP28.41■■■□□ 2.14
CTSA-203ENST00000372459 GOLGA6L6A8MZA4 724 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 LAD1O00515 517 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms