RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 NLRP12P59046 1061 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ITIH3Q06033 890 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 POLA2Q14181 598 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 LRRC43Q8N309 656 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 DYNLL1P63167 89 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 GPBP1Q86WP2 473 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 CD19P15391 556 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 SAT1P21673 171 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 PTPROQ16827 1216 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 TEKT3Q9BXF9 490 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 NSRP1Q9H0G5 558 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ANKFY1Q9P2R3 1169 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ADCY9O60503 1353 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 FGAP02671 866 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SCYL2Q6P3W7 929 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 NLRP10Q86W26 655 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 DCLK2Q8N568 766 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 STAMQ92783 540 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 ZNF274Q96GC6 653 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 STMN4Q9H169 189 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 ST7Q9NRC1 585 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 RSPH14Q9UHP6 348 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 ERVV-1B6SEH8 477 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 NOL3O60936 208 aaKnown RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 NPR1P16066 1061 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 YARSP54577 528 aaKnown RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC89Q8N998 374 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC110Q8TBZ0 833 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 UBE3CQ15386 1083 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 ARMC9Q7Z3E5 817 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 GDF11O95390 407 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 TNNI1P19237 187 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 CYP26C1Q6V0L0 522 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 TAB2Q9NYJ8 693 aa10.83□□□□□ -0.68
COL4A6-202ENST00000372216 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 COPRSQ9NQ92 184 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 UBN2Q6ZU65 1347 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 SCG2P13521 617 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 DPP9Q86TI2 863 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PLA2G4DQ86XP0 818 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
COL4A6-202ENST00000372216 KIAA1524Q8TCG1 905 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 TACC3Q9Y6A5 838 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 RNF123Q5XPI4 1314 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PALM3A6NDB9 673 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-202ENST00000372216 TNNC1P63316 161 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PNOCQ13519 176 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PPP2R5AQ15172 486 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 MLKLQ8NB16 471 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 SERTAD1Q9UHV2 236 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 USP14P54578 494 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 SUPT20HL1Q3ZLR7 823 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 SYT10Q6XYQ8 523 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 ZBTB8OSQ8IWT0 167 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
COL4A6-202ENST00000372216 GIPC1O14908 333 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 P4HA1P13674 534 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 GRAPQ13588 217 aa10.82□□□□□ -0.68
COL4A6-202ENST00000372216 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-202ENST00000372216 GPR101Q96P66 508 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-202ENST00000372216 CYP2J2P51589 502 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 FANCCQ00597 558 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 KCTD1Q719H9 257 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 TM6SF1Q9BZW5 370 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 LIG4P49917 911 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 KCTD2Q14681 263 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 SUSD4Q5VX71 490 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 NEK8Q86SG6 692 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC125Q86Z20 511 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 NUP58Q9BVL2 599 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 GPR108Q9NPR9 543 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 MTRF1LQ9UGC7 380 aaKnown RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 KCNG1Q9UIX4 513 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PNMA2Q9UL42 364 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 ARHGAP44Q17R89 818 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 DBNLQ9UJU6 430 aaKnown RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PALD1Q9ULE6 856 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 K7ENM7 598 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 TUBB4AP04350 444 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 BCRP11274 1271 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 FAM160B1Q5W0V3 765 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 NOSTRINQ8IVI9 506 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PSMB7Q99436 277 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PRDM5Q9NQX1 630 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 327.3 ms