RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KRT8P05787 483 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 GYG2O15488 501 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 ECE1P42892 770 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 DEXIO95424 95 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 ATP6V0A1Q93050 837 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 SH3GL2Q99962 352 aa16.67■□□□□ 0.26
COL5A1-201ENST00000371817 NR1I2O75469 434 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 CYP7A1P22680 504 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 CHMLP26374 656 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 BATF3Q9NR55 127 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 BUB1O43683 1085 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 DNM2P50570 870 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 CHCHD3Q9NX63 227 aaKnown RBP16.66■□□□□ 0.26
COL5A1-201ENST00000371817 STRIP2Q9ULQ0 834 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 TBC1D1Q86TI0 1168 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-201ENST00000371817 STAMBPL1Q96FJ0 436 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 MEIS3Q99687 375 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 GSTA4O15217 222 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 TAF12Q16514 161 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 RNF207Q6ZRF8 634 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 PARP9Q8IXQ6 854 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 NPR1P16066 1061 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 EIF3BP55884 814 aaKnown RBP16.66■□□□□ 0.26
COL5A1-201ENST00000371817 CASP8Q14790 479 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 H3BRJ5 948 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 KRT81Q14533 505 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 TRIM59Q8IWR1 403 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 EPB41L5Q9HCM4 733 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 RAB20Q9NX57 234 aa16.66■□□□□ 0.26
COL5A1-201ENST00000371817 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-201ENST00000371817 ABCB4P21439 1286 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 ADAM21Q9UKJ8 722 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 EPN1Q9Y6I3 576 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-201ENST00000371817 ATF7P17544 494 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-201ENST00000371817 STXBP3O00186 592 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 CARSP49589 748 aaKnown RBP16.65■□□□□ 0.26
COL5A1-201ENST00000371817 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-201ENST00000371817 FLCNQ8NFG4 579 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 RXRAP19793 462 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL5A1-201ENST00000371817 MAML1Q92585 1016 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
COL5A1-201ENST00000371817 TRIM37O94972 964 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 XRCC5P13010 732 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 KIF11P52732 1056 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 PHKBQ93100 1093 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 TBC1D23Q9NUY8 699 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 MRPL44Q9H9J2 332 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 H0Y3Z8 333 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 GCNT3O95395 438 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 PNOCQ13519 176 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 CEP55Q53EZ4 464 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 B4DLN1 442 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 PTPRGP23470 1445 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 ADAT2Q7Z6V5 191 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 UHMK1Q8TAS1 419 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 LSM14BQ9BX40 385 aaKnown RBP16.64■□□□□ 0.25
COL5A1-201ENST00000371817 NLRC4Q9NPP4 1024 aa16.64■□□□□ 0.25
COL5A1-201ENST00000371817 PFDN6O15212 129 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 TTI1O43156 1089 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
COL5A1-201ENST00000371817 DACH2Q96NX9 599 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 KLC4Q9NSK0 619 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 IPO11Q9UI26 975 aaKnown RBP16.63■□□□□ 0.25
COL5A1-201ENST00000371817 ARHGDIAP52565 204 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 GDAP1Q8TB36 358 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 FMO2Q99518 471 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 SLFN14P0C7P3 912 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 MORC3Q14149 939 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
COL5A1-201ENST00000371817 SNX5Q9Y5X3 404 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 NSD2O96028 1365 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 STAT2P52630 851 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 PYGLP06737 847 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 CFAP73A6NFT4 308 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 ZMYND10O75800 440 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 ESRRBO95718 433 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms