RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 GJA5P36382 358 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 RPAP3Q9H6T3 665 aaPredicted RBP12.67□□□□□ -0.38
BRCC3-204ENST00000369462 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 GJB4Q9NTQ9 266 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 CXCL11O14625 94 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
BRCC3-204ENST00000369462 PKN1Q16512 942 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 CHURC1Q8WUH1 139 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
BRCC3-204ENST00000369462 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 PIGSQ96S52 555 aa12.67□□□□□ -0.38
BRCC3-204ENST00000369462 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 WASF1Q92558 559 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 STX6O43752 255 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 BTNL9Q6UXG8 535 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 FEM1BQ9UK73 627 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 H3BQV1 296 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 FLOT1O75955 427 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SCG2P13521 617 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
BRCC3-204ENST00000369462 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-204ENST00000369462 SNAP25P60880 206 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 ZNF157P51786 506 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-204ENST00000369462 FSTL1Q12841 308 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 FBXO18Q8NFZ0 1043 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 GPKOWQ92917 476 aaPredicted RBP eCLIP12.65□□□□□ -0.38
BRCC3-204ENST00000369462 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
BRCC3-204ENST00000369462 ZBTB5O15062 677 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 PLA2G6O60733 806 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 NUCB2P80303 420 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 PRPF38AQ8NAV1 312 aaKnown RBP12.64□□□□□ -0.39
BRCC3-204ENST00000369462 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 SLF1Q9BQI6 1058 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 ABT1Q9ULW3 272 aaKnown RBP12.64□□□□□ -0.39
BRCC3-204ENST00000369462 PNMA6FA0A0J9YX94 578 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 TRIM29Q14134 588 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-204ENST00000369462 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-204ENST00000369462 MTMR6Q9Y217 621 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
BRCC3-204ENST00000369462 XBP1P17861 261 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 KRT40Q6A162 431 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 WWC2Q6AWC2 1192 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 CATSPERGQ6ZRH7 1159 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L15C9J2P7 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L13C9JLJ4 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L11C9JVI0 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L18D6R9N7 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L22D6RA61 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L17D6RBQ6 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L19D6RCP7 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L20D6RJB6 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 BRD1O95696 1058 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-204ENST00000369462 USP17L24Q0WX57 530 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 FASTKD5Q7L8L6 764 aaKnown RBP12.63□□□□□ -0.39
BRCC3-204ENST00000369462 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 PPP1R9AQ9ULJ8 1098 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
BRCC3-204ENST00000369462 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
BRCC3-204ENST00000369462 MYH6P13533 1939 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
BRCC3-204ENST00000369462 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
BRCC3-204ENST00000369462 MOGSQ13724 837 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 COG2Q14746 738 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
BRCC3-204ENST00000369462 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms