RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 CCDC170Q8IYT3 715 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 IQCKQ8N0W5 287 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 IQSEC3Q9UPP2 1182 aaPredicted RBP18.06■□□□□ 0.48
CHD1L-203ENST00000369259 KIF3CO14782 793 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 EZRP15311 586 aaKnown RBP18.06■□□□□ 0.48
CHD1L-203ENST00000369259 PRLRP16471 622 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 MDH1P40925 334 aaKnown RBP18.06■□□□□ 0.48
CHD1L-203ENST00000369259 MATR3P43243 847 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■■■■■ 27.4
CHD1L-203ENST00000369259 KIF5AQ12840 1032 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 CYB5D1Q6P9G0 228 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 CCDC121Q6ZUS5 278 aa18.06■□□□□ 0.48
CHD1L-203ENST00000369259 A0A1B0GUA9 196 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 TRIM75PA6NK02 468 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 LGALS16A8MUM7 142 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 PDHBP11177 359 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 IBSPP21815 317 aaPredicted RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 LIFRP42702 1097 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 TRIM58Q8NG06 486 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 OXER1Q8TDS5 423 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 NHEJ1Q9H9Q4 299 aaPredicted RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 POLD4Q9HCU8 107 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 ZNHIT6Q9NWK9 470 aaKnown RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 LTN1O94822 1766 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 H7C1D1 291 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 H7C1W4 665 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 PARP1P09874 1014 aaKnown RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 VAV2P52735 878 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 CD302Q8IX05 232 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 FUKQ8N0W3 1084 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 STAMQ92783 540 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 ZNF594Q96JF6 807 aaPredicted RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
CHD1L-203ENST00000369259 BLZF1Q9H2G9 400 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 VPS54Q9P1Q0 977 aa18.05■□□□□ 0.48
CHD1L-203ENST00000369259 CIAO1O76071 339 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 LTKP29376 864 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 ZAP70P43403 619 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 CLNS1AP54105 237 aaKnown RBP18.04■□□□□ 0.48
CHD1L-203ENST00000369259 FAM228AQ86W67 206 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 ZNF507Q8TCN5 953 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 TRIM6Q9C030 488 aaPredicted RBP18.04■□□□□ 0.48
CHD1L-203ENST00000369259 XDHP47989 1333 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 E7EVH7 732 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 TACC1O75410 805 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 CLSTN1O94985 981 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 DEXIO95424 95 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 EGFL6Q8IUX8 553 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
CHD1L-203ENST00000369259 FERMT2Q96AC1 680 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 SGSM3Q96HU1 749 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 CEP126Q9P2H0 1117 aa18.04■□□□□ 0.48
CHD1L-203ENST00000369259 PES1O00541 588 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 RTN2O75298 545 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 SCARF1Q14162 830 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 TLDC1Q6P9B6 456 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 IRF2BP1Q8IU81 584 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 OSBPL9Q96SU4 736 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 IFIT3O14879 490 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 TCP1P17987 556 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 ADORA1P30542 326 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 CYP27A1Q02318 531 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 GLE1Q53GS7 698 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 CCDC181Q5TID7 509 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 ZNF658Q5TYW1 1059 aaPredicted RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 PPP4R3AQ6IN85 833 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 C8orf74Q6P047 294 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 ATP6V1G3Q96LB4 118 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 ATP6V0A4Q9HBG4 840 aa18.03■□□□□ 0.48
CHD1L-203ENST00000369259 TPX2Q9ULW0 747 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
CHD1L-203ENST00000369259 SIPA1L3O60292 1781 aaPredicted RBP18.02■□□□□ 0.48
CHD1L-203ENST00000369259 IRX1P78414 480 aaPredicted RBP18.02■□□□□ 0.48
CHD1L-203ENST00000369259 IFT20Q8IY31 132 aa18.02■□□□□ 0.48
CHD1L-203ENST00000369259 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
CHD1L-203ENST00000369259 PUS3Q9BZE2 481 aaKnown RBP18.02■□□□□ 0.48
CHD1L-203ENST00000369259 SLIT3O75094 1523 aa18.02■□□□□ 0.48
CHD1L-203ENST00000369259 HMGB1P1B2RPK0 211 aaPredicted RBP18.02■□□□□ 0.47
CHD1L-203ENST00000369259 GTPBP6O43824 516 aaPredicted RBP18.02■□□□□ 0.47
CHD1L-203ENST00000369259 ECM2O94769 699 aaPredicted RBP18.02■□□□□ 0.47
CHD1L-203ENST00000369259 SLC8A1P32418 973 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 C11orf91Q3C1V1 193 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 FKBP15Q5T1M5 1219 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 SLC24A3Q9HC58 644 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 LRWD1Q9UFC0 647 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 NID2Q14112 1375 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 TNRQ92752 1358 aa18.02■□□□□ 0.47
CHD1L-203ENST00000369259 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 SETD1BQ9UPS6 1966 aaKnown RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 EEF1GP26641 437 aaKnown RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 PAFAH1B1P43034 410 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms