RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 CCL5P13501 91 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 PSMA5P28066 241 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 INPP5BP32019 993 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 GHRHRQ02643 423 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 GNL2Q13823 731 aaKnown RBP5.51□□□□□ -1.53
CTSS-201ENST00000368985 PKP1Q13835 747 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 ALX1Q15699 326 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 PRAMEF18Q5VWM3 479 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 AMOTL1Q8IY63 956 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 GMCL1P1Q8NEA9 526 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 UPF3AQ9H1J1 476 aaKnown RBP5.51□□□□□ -1.53
CTSS-201ENST00000368985 DNAJC18Q9H819 358 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 ANAPC4Q9UJX5 808 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 Q9Y3F1 56 aa5.51□□□□□ -1.53
CTSS-201ENST00000368985 ERICH2A1L162 156 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 USP17L10C9JJH3 530 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 MNX1P50219 401 aaPredicted RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 MFSD6Q6ZSS7 791 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 IFNL3Q8IZI9 196 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 CRACR2BQ8N4Y2 399 aaPredicted RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 UBAC1Q9BSL1 405 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 VAT1LQ9HCJ6 419 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 TMOD4Q9NZQ9 345 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 TSPY2A6NKD2 308 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 H3BQV1 296 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 LARGE1O95461 756 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 HSPA4P34932 840 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 PSMC4P43686 418 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 MAMDC4Q6UXC1 1216 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 GPRC5AQ8NFJ5 357 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 SH3RF3Q8TEJ3 882 aaPredicted RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 CRNKL1Q9BZJ0 848 aaKnown RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 SLC5A4Q9NY91 659 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 NYAP2Q9P242 653 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 TMX2Q9Y320 296 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 KLF18A0A0U1RQI7 1052 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 E7EWF7 191 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 PRC1O43663 620 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 IKQ13123 557 aaPredicted RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 ZYXQ15942 572 aaKnown RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 TMEM67Q5HYA8 995 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 FAM173BQ6P4H8 233 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 DLK2Q6UY11 383 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 KIF2CQ99661 725 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.5□□□□□ -1.53
CTSS-201ENST00000368985 TCP11L1Q9NUJ3 509 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 CTNNA3Q9UI47 895 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 NMT2O60551 498 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 RBM25P49756 843 aaKnown RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 CAP1Q01518 475 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 SYNE3Q6ZMZ3 975 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 CLEC10AQ8IUN9 316 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 MAP4K1Q92918 833 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 ASCC2Q9H1I8 757 aaPredicted RBP5.5□□□□□ -1.53
CTSS-201ENST00000368985 ZNF287Q9HBT7 754 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 HELLSQ9NRZ9 838 aa5.5□□□□□ -1.53
CTSS-201ENST00000368985 PCNTO95613 3336 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 DNM1LO00429 736 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 PTPREP23469 700 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 SHMT1P34896 483 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 MAP2K5Q13163 448 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 STOX1Q6ZVD7 989 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 GDF15Q99988 308 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 HOXC10Q9NYD6 342 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 SERPINB13Q9UIV8 391 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 CCDC69A6NI79 296 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 ADCY3O60266 1144 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 JAK2O60674 1132 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 ERVK-9P63128 1117 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 ERVK-24P63145 666 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 MIGA2Q7L4E1 593 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 PLEKHH3Q7Z736 793 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 RIOX2Q8IUF8 465 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 REPS2Q8NFH8 660 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 ZKSCAN4Q969J2 545 aaPredicted RBP5.49□□□□□ -1.53
CTSS-201ENST00000368985 STRBPQ96SI9 672 aaKnown RBP5.49□□□□□ -1.53
CTSS-201ENST00000368985 CIZ1Q9ULV3 898 aaPredicted RBP5.49□□□□□ -1.53
CTSS-201ENST00000368985 PHF24Q9UPV7 400 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 FIBPO43427 364 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 HERVK_113P62684 666 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 TBC1D10CQ8IV04 446 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 CDAN1Q8IWY9 1227 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 ZNF444Q8N0Y2 327 aaPredicted RBP5.49□□□□□ -1.53
CTSS-201ENST00000368985 RGS22Q8NE09 1264 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 NCOA7Q8NI08 942 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 RAET1EQ8TD07 263 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 TOX2Q96NM4 488 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 NUDT12Q9BQG2 462 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 GJB4Q9NTQ9 266 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 FZD1Q9UP38 647 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 LIMCH1Q9UPQ0 1083 aa5.49□□□□□ -1.53
CTSS-201ENST00000368985 POTEFA5A3E0 1075 aa5.48□□□□□ -1.53
CTSS-201ENST00000368985 CYBAP13498 195 aa5.48□□□□□ -1.53
CTSS-201ENST00000368985 DSG3P32926 999 aa5.48□□□□□ -1.53
CTSS-201ENST00000368985 GUCY1A2P33402 732 aa5.48□□□□□ -1.53
CTSS-201ENST00000368985 GRM1Q13255 1194 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms