RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 BUB1BO60566 1050 aaPredicted RBP25.4■■□□□ 1.66
NPAS3-201ENST00000346562 TFDP1Q14186 410 aa25.4■■□□□ 1.66
NPAS3-201ENST00000346562 KRBA2Q6ZNG9 492 aa25.4■■□□□ 1.66
NPAS3-201ENST00000346562 TROVE2P10155 538 aaKnown RBP eCLIP25.4■■□□□ 1.66
NPAS3-201ENST00000346562 NEURL1BA8MQ27 555 aa25.39■■□□□ 1.66
NPAS3-201ENST00000346562 IPO11Q9UI26 975 aaKnown RBP25.39■■□□□ 1.66
NPAS3-201ENST00000346562 U2AF2P26368 475 aaKnown RBP eCLIP25.39■■□□□ 1.66
NPAS3-201ENST00000346562 CDC37L1Q7L3B6 337 aa25.39■■□□□ 1.66
NPAS3-201ENST00000346562 DDX25Q9UHL0 483 aaKnown RBP25.39■■□□□ 1.66
NPAS3-201ENST00000346562 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
NPAS3-201ENST00000346562 DDAH1O94760 285 aa25.39■■□□□ 1.66
NPAS3-201ENST00000346562 RPGRIP1Q96KN7 1286 aa25.39■■□□□ 1.66
NPAS3-201ENST00000346562 TRIM56Q9BRZ2 755 aaKnown RBP25.39■■□□□ 1.66
NPAS3-201ENST00000346562 TRIM37O94972 964 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 PPFIA1Q13136 1202 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 PNOCQ13519 176 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 NLRC4Q9NPP4 1024 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 NUP153P49790 1475 aaKnown RBP25.39■■□□□ 1.65
NPAS3-201ENST00000346562 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 KIF24Q5T7B8 1368 aa25.39■■□□□ 1.65
NPAS3-201ENST00000346562 KCNJ18B7U540 433 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 TMEM191BP0C7N4 346 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 KCNJ12Q14500 433 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 KRT3P12035 628 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 ARHGAP25P42331 645 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 ICA1Q05084 483 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 PPP2R5EQ16537 467 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 SEPT10Q9P0V9 454 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 POLR2BP30876 1174 aaKnown RBP25.38■■□□□ 1.65
NPAS3-201ENST00000346562 TECP42680 631 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 POLGP54098 1239 aaPredicted RBP25.38■■□□□ 1.65
NPAS3-201ENST00000346562 PSMB7Q99436 277 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 USP17L12C9JPN9 530 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 USP17L21D6R901 530 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 INPP5BP32019 993 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 MAP3K21Q5TCX8 1036 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 ARHGAP27Q6ZUM4 889 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 NEK8Q86SG6 692 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 CNKSR1Q969H4 720 aa25.38■■□□□ 1.65
NPAS3-201ENST00000346562 BTDP43251 543 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 EIF4A1P60842 406 aaKnown RBP25.37■■□□□ 1.65
NPAS3-201ENST00000346562 PCDHA12Q9UN75 941 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 RNF40O75150 1001 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 MAST1Q9Y2H9 1570 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 ZMYM6O95789 1325 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 ESYT2A0FGR8 921 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 OR52Z1P0C646 297 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 SLC17A8Q8NDX2 589 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 TRIM58Q8NG06 486 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 CCDC68Q9H2F9 335 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 NDUFB9Q9Y6M9 179 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 MORC3Q14149 939 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 GPIHBP1Q8IV16 184 aa25.37■■□□□ 1.65
NPAS3-201ENST00000346562 ZNF274Q96GC6 653 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-201ENST00000346562 PPFIA4O75335 1185 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 RINT1Q6NUQ1 792 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 SESTD1Q86VW0 696 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 IFNL3Q8IZI9 196 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 TLR3O15455 904 aaKnown RBP25.36■■□□□ 1.65
NPAS3-201ENST00000346562 SORBS3O60504 671 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 PLA2G4DQ86XP0 818 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 TRMT44Q8IYL2 757 aaKnown RBP25.36■■□□□ 1.65
NPAS3-201ENST00000346562 RASSF2P50749 326 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 PNMA6EA0A0J9YXQ4 647 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 XPOTO43592 962 aaKnown RBP25.36■■□□□ 1.65
NPAS3-201ENST00000346562 COL4A3BPQ9Y5P4 624 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 STX2P32856 288 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 IFRD2Q12894 506 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-201ENST00000346562 PRPSAP1Q14558 356 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 HVCN1Q96D96 273 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 RPS6KC1Q96S38 1066 aa25.36■■□□□ 1.65
NPAS3-201ENST00000346562 NOSTRINQ8IVI9 506 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 ZNF496Q96IT1 587 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 ADCY8P40145 1251 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 CABS1Q96KC9 395 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 TESK2Q96S53 571 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 CCNA1P78396 465 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 FAM178BQ8IXR5 827 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 STAMQ92783 540 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 RASSF4Q9H2L5 321 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 RGS16O15492 202 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 ABCB4P21439 1286 aa25.35■■□□□ 1.65
NPAS3-201ENST00000346562 GARSP41250 739 aaKnown RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 LRRC47Q8N1G4 583 aaKnown RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 METTL14Q9HCE5 456 aaKnown RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 ARMCX3Q9UH62 379 aaPredicted RBP25.35■■□□□ 1.65
NPAS3-201ENST00000346562 S100BP04271 92 aaPredicted RBP25.34■■□□□ 1.65
NPAS3-201ENST00000346562 KRT71Q3SY84 523 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 ARMCX5Q6P1M9 558 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 HAUS8Q9BT25 410 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 TM6SF1Q9BZW5 370 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 A0A1B0GUA9 196 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
NPAS3-201ENST00000346562 PIK3CAP42336 1068 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 CCDC170Q8IYT3 715 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 SUGCTQ9HAC7 445 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 SLAIN2Q9P270 581 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 CCPG1Q9ULG6 757 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 SCYL1Q96KG9 808 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 OSBPP22059 807 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms