RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
MCPH1-201ENST00000344683 TRPC5Q9UL62 973 aaPredicted RBP9.11□□□□□ -0.95
MCPH1-201ENST00000344683 CFAP73A6NFT4 308 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 DAB1O75553 588 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 NPR1P16066 1061 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 CYP7A1P22680 504 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 SF3A3Q12874 501 aaKnown RBP eCLIP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 E2F4Q16254 413 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 ANKRD44Q8N8A2 993 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TMEM87BQ96K49 555 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 C10orf88Q9H8K7 445 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 STAM2O75886 525 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 SRGAP2BP0DMP2 458 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 CAPRIN2Q6IMN6 1127 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 ING2Q9H160 280 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 H3BRJ5 948 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 PARP1P09874 1014 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 RBM6P78332 1123 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 RRAGAQ7L523 313 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TRIM59Q8IWR1 403 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 NFE2L3Q9Y4A8 694 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 CTNND1O60716 968 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 ESRRAP11474 423 aaPredicted RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 ETF1P62495 437 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 SH3GL2Q99962 352 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 KIF14Q15058 1648 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 WBP4O75554 376 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TRPC1P48995 793 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 STAT2P52630 851 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 AKNAD1Q5T1N1 836 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 STRIP2Q9ULQ0 834 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 TRIM33Q9UPN9 1127 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 GLE1Q53GS7 698 aaKnown RBP9.1□□□□□ -0.95
MCPH1-201ENST00000344683 RAPH1Q70E73 1250 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 FAM96AQ9H5X1 160 aa9.1□□□□□ -0.95
MCPH1-201ENST00000344683 DEAF1O75398 565 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 NSFP46459 744 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 BLVRAP53004 296 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 LZTS2Q9BRK4 669 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 MRPL44Q9H9J2 332 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ATP6V0A4Q9HBG4 840 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 MID2Q9UJV3 735 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ANAPC5Q9UJX4 755 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ACTN1P12814 892 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ADCY2Q08462 1091 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 HP1BP3Q5SSJ5 553 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 OR9Q1Q8NGQ5 310 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ANKRD2Q9GZV1 360 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 SLC52A1Q9NWF4 448 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 NCOA1Q15788 1441 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 STXBP3O00186 592 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 SCG2P13521 617 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 TMED10P49755 219 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 GUCY2DQ02846 1103 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 GRAMD1BQ3KR37 738 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 TBC1D23Q9NUY8 699 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 CDC23Q9UJX2 597 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 AOX1Q06278 1338 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 CTTNBP2Q8WZ74 1663 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 TNNI2P48788 182 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ANO5Q75V66 913 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 PPP1R13BQ96KQ4 1090 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ZNF229Q9UJW7 825 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 KCNJ18B7U540 433 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 PDE6BP35913 854 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 KCNJ12Q14500 433 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 NBPF20Q3BBV1 942 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 NCAPH2Q6IBW4 605 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 PPP1R2P3Q6NXS1 205 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 XPO4Q9C0E2 1151 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 NEUROG2Q9H2A3 272 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 SLC24A3Q9HC58 644 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 DDX28Q9NUL7 540 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 SUCLA2Q9P2R7 463 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 RNF113AO15541 343 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 GCNT3O95395 438 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 IL15P40933 162 aaPredicted RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 PSMC1P62191 440 aaKnown RBP9.09□□□□□ -0.95
MCPH1-201ENST00000344683 CUL1Q13616 776 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 RNF169Q8NCN4 708 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 POMGNT1Q8WZA1 660 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 CCPG1Q9ULG6 757 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 ATP11BQ9Y2G3 1177 aa9.09□□□□□ -0.95
MCPH1-201ENST00000344683 SUFUQ9UMX1 484 aa9.08□□□□□ -0.96
MCPH1-201ENST00000344683 NR1D1P20393 614 aa9.08□□□□□ -0.96
MCPH1-201ENST00000344683 DRP2Q13474 957 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms