RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 DHX16O60231 1041 aaKnown RBP21.74■■□□□ 1.07
TSSC4-201ENST00000333256 SNAP25P60880 206 aa21.74■■□□□ 1.07
TSSC4-201ENST00000333256 NID2Q14112 1375 aa21.74■■□□□ 1.07
TSSC4-201ENST00000333256 RBM28Q9NW13 759 aaKnown RBP21.74■■□□□ 1.07
TSSC4-201ENST00000333256 TESPA1A2RU30 521 aaPredicted RBP21.73■■□□□ 1.07
TSSC4-201ENST00000333256 CPLX1O14810 134 aa21.73■■□□□ 1.07
TSSC4-201ENST00000333256 CYTH3O43739 400 aa21.73■■□□□ 1.07
TSSC4-201ENST00000333256 ASCC2Q9H1I8 757 aaPredicted RBP21.73■■□□□ 1.07
TSSC4-201ENST00000333256 FEM1BQ9UK73 627 aa21.73■■□□□ 1.07
TSSC4-201ENST00000333256 CCDC196A0A1B0GTZ2 297 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 hCG_1642624A0A1W2PR95 340 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 CYP2C8P10632 490 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 HOXA7P31268 230 aaPredicted RBP21.72■■□□□ 1.07
TSSC4-201ENST00000333256 IRX3P78415 501 aaPredicted RBP21.72■■□□□ 1.07
TSSC4-201ENST00000333256 ANKRD23Q86SG2 305 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 ADGRF4Q8IZF3 695 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 PHKBQ93100 1093 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 SLF1Q9BQI6 1058 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 PRR12Q9ULL5 1215 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 SREBF2Q12772 1141 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 NTRK3Q16288 839 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 SYDE2Q5VT97 1194 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 IFNL1Q8IU54 200 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 CHURC1Q8WUH1 139 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 ATG4CQ96DT6 458 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 PCNTO95613 3336 aa21.72■■□□□ 1.07
TSSC4-201ENST00000333256 CTDNEP1O95476 244 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 GNAQP50148 359 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 FUT2Q10981 343 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 COG2Q14746 738 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 PPP2R5BQ15173 497 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 BTNL9Q6UXG8 535 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 HOMER1Q86YM7 354 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 P2RX7Q99572 595 aaKnown RBP21.71■■□□□ 1.07
TSSC4-201ENST00000333256 PPP1R9AQ9ULJ8 1098 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 CEP350Q5VT06 3117 aa21.71■■□□□ 1.07
TSSC4-201ENST00000333256 SPDYE16A6NNV3 312 aaPredicted RBP21.7■■□□□ 1.06
TSSC4-201ENST00000333256 PEX10O60683 326 aa21.7■■□□□ 1.06
TSSC4-201ENST00000333256 ANP32AP39687 249 aaKnown RBP21.7■■□□□ 1.06
TSSC4-201ENST00000333256 INHBEP58166 350 aa21.7■■□□□ 1.06
TSSC4-201ENST00000333256 PABPC4Q13310 644 aaKnown RBP eCLIP21.7■■□□□ 1.065e-6■■■■□ 22.3
TSSC4-201ENST00000333256 FAM160B2Q86V87 743 aa21.7■■□□□ 1.06
TSSC4-201ENST00000333256 PRPF38AQ8NAV1 312 aaKnown RBP21.7■■□□□ 1.06
TSSC4-201ENST00000333256 JMJD4Q9H9V9 463 aa21.7■■□□□ 1.06
TSSC4-201ENST00000333256 CNTNAP5Q8WYK1 1306 aa21.7■■□□□ 1.06
TSSC4-201ENST00000333256 JAK2O60674 1132 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 OSBPP22059 807 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 DSG3P32926 999 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 TM4SF4P48230 202 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 PIGSQ96S52 555 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 FOXD4L1Q9NU39 408 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 PLA2G6O60733 806 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 IFNAR1P17181 557 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 HERVK_113P62684 666 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 POTEEQ6S8J3 1075 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 SPZ1Q9BXG8 430 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 SLC26A6Q9BXS9 759 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
TSSC4-201ENST00000333256 V9GY48 417 aaPredicted RBP21.69■■□□□ 1.06
TSSC4-201ENST00000333256 SLC4A3P48751 1232 aa21.68■■□□□ 1.06
TSSC4-201ENST00000333256 CPLX2Q6PUV4 134 aaKnown RBP21.68■■□□□ 1.06
TSSC4-201ENST00000333256 SPRYD3Q8NCJ5 442 aa21.68■■□□□ 1.06
TSSC4-201ENST00000333256 NSUN7Q8NE18 718 aaKnown RBP21.68■■□□□ 1.06
TSSC4-201ENST00000333256 SMCR8Q8TEV9 937 aaPredicted RBP21.68■■□□□ 1.06
TSSC4-201ENST00000333256 DDX11Q96FC9 970 aa21.68■■□□□ 1.06
TSSC4-201ENST00000333256 HOXC10Q9NYD6 342 aa21.68■■□□□ 1.06
TSSC4-201ENST00000333256 BAZ2BQ9UIF8 2168 aaKnown RBP21.67■■□□□ 1.06
TSSC4-201ENST00000333256 PTPDC1A2A3K4 754 aa21.67■■□□□ 1.06
TSSC4-201ENST00000333256 VWA5AO00534 786 aa21.67■■□□□ 1.06
TSSC4-201ENST00000333256 TAL1P17542 331 aaPredicted RBP21.67■■□□□ 1.06
TSSC4-201ENST00000333256 CCDC174Q6PII3 467 aa21.67■■□□□ 1.06
TSSC4-201ENST00000333256 PNMA3Q9UL41 463 aa21.67■■□□□ 1.06
TSSC4-201ENST00000333256 SLC45A1Q9Y2W3 748 aa21.67■■□□□ 1.06
TSSC4-201ENST00000333256 MAP2K2P36507 400 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 CUL4AQ13619 759 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 TAF1CQ15572 869 aaPredicted RBP21.66■■□□□ 1.06
TSSC4-201ENST00000333256 CDC37Q16543 378 aaPredicted RBP21.66■■□□□ 1.06
TSSC4-201ENST00000333256 OTUD7BQ6GQQ9 843 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 RRP36Q96EU6 259 aaKnown RBP21.66■■□□□ 1.06
TSSC4-201ENST00000333256 PAGR1Q9BTK6 254 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 CDKL5O76039 1030 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 SSRP1Q08945 709 aaKnown RBP21.66■■□□□ 1.06
TSSC4-201ENST00000333256 BECN1Q14457 450 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 CPXCR1Q8N123 301 aa21.66■■□□□ 1.06
TSSC4-201ENST00000333256 RLFQ13129 1914 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 FMNL1O95466 1100 aaPredicted RBP21.65■■□□□ 1.06
TSSC4-201ENST00000333256 SMARCA1P28370 1054 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 QRICH1Q2TAL8 776 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 PARK7Q99497 189 aaKnown RBP21.65■■□□□ 1.06
TSSC4-201ENST00000333256 RANBP17Q9H2T7 1088 aaKnown RBP21.65■■□□□ 1.06
TSSC4-201ENST00000333256 SLC38A10Q9HBR0 1119 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 RAVER2Q9HCJ3 691 aaKnown RBP21.65■■□□□ 1.06
TSSC4-201ENST00000333256 TXNRD2Q9NNW7 524 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 ADAMTS5Q9UNA0 930 aa21.65■■□□□ 1.06
TSSC4-201ENST00000333256 CTDP1Q9Y5B0 961 aaPredicted RBP21.65■■□□□ 1.06
TSSC4-201ENST00000333256 MYPNQ86TC9 1320 aa21.64■■□□□ 1.06
TSSC4-201ENST00000333256 ZBTB5O15062 677 aa21.64■■□□□ 1.05
TSSC4-201ENST00000333256 PPP1R11O60927 126 aaPredicted RBP21.64■■□□□ 1.05
TSSC4-201ENST00000333256 ZBED4O75132 1171 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms