RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 C8orf76Q96K31 380 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 TMOD4Q9NZQ9 345 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 VCAM1P19320 739 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 L1TD1Q5T7N2 865 aaKnown RBP18.65■□□□□ 0.58
TUBB3-201ENST00000315491 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
TUBB3-201ENST00000315491 H3BQV1 296 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 CXCL11O14625 94 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 IRF6O14896 467 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 PLA2G6O60733 806 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 TOMM70O94826 608 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 SCG2P13521 617 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 STAT2P52630 851 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 PFKFB3Q16875 520 aaPredicted RBP18.64■□□□□ 0.57
TUBB3-201ENST00000315491 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 FAM160B2Q86V87 743 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 PIGSQ96S52 555 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 FEM1BQ9UK73 627 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 MTMR6Q9Y217 621 aa18.64■□□□□ 0.57
TUBB3-201ENST00000315491 WDR33Q9C0J8 1336 aaKnown RBP18.63■□□□□ 0.57
TUBB3-201ENST00000315491 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-201ENST00000315491 BRD1O95696 1058 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 CHURC1Q8WUH1 139 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 RPAP3Q9H6T3 665 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-201ENST00000315491 SEC63Q9UGP8 760 aaKnown RBP18.63■□□□□ 0.57
TUBB3-201ENST00000315491 KCNH4Q9UQ05 1017 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 RGS22Q8NE09 1264 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 MTMR8Q96EF0 704 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 ZDHHC9Q9Y397 364 aa18.63■□□□□ 0.57
TUBB3-201ENST00000315491 TRPM7Q96QT4 1865 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 A0A0G2JLL6 359 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-201ENST00000315491 GJA5P36382 358 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 GUCY1B3Q02153 619 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 TRIM29Q14134 588 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 PRRT2Q7Z6L0 340 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-201ENST00000315491 ZNF784Q8NCA9 323 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-201ENST00000315491 FBXO18Q8NFZ0 1043 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 TANGO6Q9C0B7 1094 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
TUBB3-201ENST00000315491 XBP1P17861 261 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 HUNKP57058 714 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 GLIPR1L2Q4G1C9 344 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 KRT40Q6A162 431 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 WNK4Q96J92 1243 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 VPS54Q9P1Q0 977 aa18.61■□□□□ 0.57
TUBB3-201ENST00000315491 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 ZBTB5O15062 677 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 ZSCAN22P10073 491 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 CDC37Q16543 378 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 WWC2Q6AWC2 1192 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 QRICH1Q2TAL8 776 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 GADL1Q6ZQY3 521 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
TUBB3-201ENST00000315491 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-201ENST00000315491 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 FLOT1O75955 427 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-201ENST00000315491 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-201ENST00000315491 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 SH3GLB2Q9NR46 395 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 BARHL2Q9NY43 387 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
TUBB3-201ENST00000315491 BAZ2BQ9UIF8 2168 aaKnown RBP18.59■□□□□ 0.57
TUBB3-201ENST00000315491 MYH6P13533 1939 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L15C9J2P7 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L13C9JLJ4 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L11C9JVI0 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L18D6R9N7 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L22D6RA61 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L17D6RBQ6 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L19D6RCP7 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L20D6RJB6 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 STXBP3O00186 592 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 F13A1P00488 732 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 SNAP25P60880 206 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 USP17L24Q0WX57 530 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 FSTL1Q12841 308 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 CATSPERGQ6ZRH7 1159 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 PRPF38AQ8NAV1 312 aaKnown RBP18.58■□□□□ 0.57
TUBB3-201ENST00000315491 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.57
TUBB3-201ENST00000315491 PPP1R9AQ9ULJ8 1098 aa18.58■□□□□ 0.57
TUBB3-201ENST00000315491 PPP1R11O60927 126 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-201ENST00000315491 TREML2Q5T2D2 321 aa18.58■□□□□ 0.56
TUBB3-201ENST00000315491 FASTKD5Q7L8L6 764 aaKnown RBP18.58■□□□□ 0.56
TUBB3-201ENST00000315491 SAPCD2Q86UD0 394 aa18.58■□□□□ 0.56
TUBB3-201ENST00000315491 CCDC148Q8NFR7 591 aa18.58■□□□□ 0.56
TUBB3-201ENST00000315491 PHF20Q9BVI0 1012 aa18.58■□□□□ 0.56
TUBB3-201ENST00000315491 PTPRFP10586 1907 aa18.57■□□□□ 0.56
TUBB3-201ENST00000315491 MMP1P03956 469 aa18.57■□□□□ 0.56
TUBB3-201ENST00000315491 ZBTB48P10074 688 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms