RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SMC5Q8IY18 1101 aa15.01□□□□□ -0.01
CKS2-201ENST00000314355 LRRC47Q8N1G4 583 aaKnown RBP15.01□□□□□ -0.01
CKS2-201ENST00000314355 MSL3Q8N5Y2 521 aaKnown RBP15.01□□□□□ -0.01
CKS2-201ENST00000314355 CHST13Q8NET6 341 aa15.01□□□□□ -0.01
CKS2-201ENST00000314355 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
CKS2-201ENST00000314355 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
CKS2-201ENST00000314355 ZMYND8Q9ULU4 1186 aaPredicted RBP15.01□□□□□ -0.01
CKS2-201ENST00000314355 ATP2A1O14983 1001 aa15□□□□□ -0.01
CKS2-201ENST00000314355 PGK2P07205 417 aa15□□□□□ -0.01
CKS2-201ENST00000314355 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
CKS2-201ENST00000314355 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
CKS2-201ENST00000314355 PRAMEF19Q5SWL8 479 aa15□□□□□ -0.01
CKS2-201ENST00000314355 MFSD6Q6ZSS7 791 aa15□□□□□ -0.01
CKS2-201ENST00000314355 RNF180Q86T96 592 aa15□□□□□ -0.01
CKS2-201ENST00000314355 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
CKS2-201ENST00000314355 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
CKS2-201ENST00000314355 RNF41Q9H4P4 317 aaPredicted RBP15□□□□□ -0.01
CKS2-201ENST00000314355 RAVER2Q9HCJ3 691 aaKnown RBP15□□□□□ -0.01
CKS2-201ENST00000314355 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
CKS2-201ENST00000314355 ANAPC4Q9UJX5 808 aa15□□□□□ -0.01
CKS2-201ENST00000314355 FGAP02671 866 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
CKS2-201ENST00000314355 COL6A1P12109 1028 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 SYN1P17600 705 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 MCCP23508 829 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 MNX1P50219 401 aaPredicted RBP14.99□□□□□ -0.01
CKS2-201ENST00000314355 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 GJC2Q5T442 439 aaPredicted RBP14.99□□□□□ -0.01
CKS2-201ENST00000314355 RCSD1Q6JBY9 416 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 EXOC6Q8TAG9 804 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 SLC38A10Q9HBR0 1119 aa14.99□□□□□ -0.01
CKS2-201ENST00000314355 PFASO15067 1338 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 HSPD1P10809 573 aaKnown RBP14.98□□□□□ -0.01
CKS2-201ENST00000314355 AKR1A1P14550 325 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 SDSP20132 328 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 BMP8BP34820 402 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 ATN1P54259 1190 aaPredicted RBP14.98□□□□□ -0.01
CKS2-201ENST00000314355 NUCB1Q02818 461 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 NMIQ13287 307 aaPredicted RBP14.98□□□□□ -0.01
CKS2-201ENST00000314355 TKFCQ3LXA3 575 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 FAM227BQ96M60 508 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
CKS2-201ENST00000314355 PLIN4Q96Q06 1357 aa14.98□□□□□ -0.01
CKS2-201ENST00000314355 CCDC171Q6TFL3 1326 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 ZNF213O14771 459 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 ORC4O43929 436 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 PLA2G6O60733 806 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 NT5C2P49902 561 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 CCDC96Q2M329 555 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 CCDC178Q5BJE1 867 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 TTC14Q96N46 770 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
CKS2-201ENST00000314355 OSBPL3Q9H4L5 887 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 ACAD9Q9H845 621 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 XPNPEP3Q9NQH7 507 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.97□□□□□ -0.01
CKS2-201ENST00000314355 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
CKS2-201ENST00000314355 BRCA2P51587 3418 aa14.97□□□□□ -0.01
CKS2-201ENST00000314355 A0A0D9SFI3 127 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 IGHDP01880 384 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 TOP1P11387 765 aaKnown RBP14.96□□□□□ -0.01
CKS2-201ENST00000314355 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 KCTD1Q719H9 257 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 ZNF467Q7Z7K2 595 aaPredicted RBP14.96□□□□□ -0.01
CKS2-201ENST00000314355 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 DCAF4Q8WV16 495 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 ESR2Q92731 530 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 GDF15Q99988 308 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 HOMER2Q9NSB8 354 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 RIPK3Q9Y572 518 aa14.96□□□□□ -0.01
CKS2-201ENST00000314355 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 IGHA2P01877 340 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 ALAS1P13196 640 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 LRRC41Q15345 812 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 AKNAD1Q5T1N1 836 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 CWC27Q6UX04 472 aaKnown RBP14.95□□□□□ -0.02
CKS2-201ENST00000314355 SLC39A5Q6ZMH5 540 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 ABHD16BQ9H3Z7 469 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 TCP11L1Q9NUJ3 509 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 ZHX1Q9UKY1 873 aaPredicted RBP14.95□□□□□ -0.02
CKS2-201ENST00000314355 CEP290O15078 2479 aa14.95□□□□□ -0.02
CKS2-201ENST00000314355 ZMYM6O95789 1325 aa14.94□□□□□ -0.02
CKS2-201ENST00000314355 ASB14A6NK59 587 aa14.94□□□□□ -0.02
CKS2-201ENST00000314355 FGRP09769 529 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms