RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 SLC5A1P13866 664 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 KLHL10Q6JEL2 608 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 HINFPQ9BQA5 517 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 NAA15Q9BXJ9 866 aaKnown RBP21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 NACAP1Q9BZK3 213 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 HDAC6Q9UBN7 1215 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 TRIM10Q9UDY6 481 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 NARFQ9UHQ1 456 aa21.24■□□□□ 0.99
HERPUD2-201ENST00000311350 GSG1L2A8MUP6 293 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 SEMA3EO15041 775 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 ERLIN2O94905 339 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 GGCXP38435 758 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 EIF5P55010 431 aaKnown RBP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 WTAPQ15007 396 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 HLFQ16534 295 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 EP400NLQ6ZTU2 488 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 MYL10Q9BUA6 226 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 RNF41Q9H4P4 317 aaPredicted RBP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 KAT14Q9H8E8 782 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 CHD4Q14839 1912 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 RNF225M0QZC1 329 aaPredicted RBP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 MBD4O95243 580 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 CDC25AP30304 524 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 ARHGAP25P42331 645 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 AARSP49588 968 aaKnown RBP eCLIP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 ERVK-24P63145 666 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 WHAMMP3Q1A5X7 153 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 SWT1Q5T5J6 900 aaKnown RBP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 KCNV1Q6PIU1 500 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 ACBD3Q9H3P7 528 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 AATFQ9NY61 560 aaKnown RBP eCLIP21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 MYO6Q9UM54 1294 aa21.23■□□□□ 0.99
HERPUD2-201ENST00000311350 ENC1O14682 589 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 MFAP3LO75121 409 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 WDR93Q6P2C0 686 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 SYNE4Q8N205 404 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 ZNF330Q9Y3S2 320 aaPredicted RBP21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 BMP15O95972 392 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 YY1P25490 414 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 HNRNPH1P31943 449 aaKnown RBP21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 AMPD2Q01433 879 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 CXorf56Q9H5V9 222 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 TACC3Q9Y6A5 838 aa21.22■□□□□ 0.99
HERPUD2-201ENST00000311350 ERICH2A1L162 156 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 SRGAP2O75044 1071 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 GYPCP04921 128 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 CASP1P29466 404 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 TUBB2AQ13885 445 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 CCDC91Q7Z6B0 441 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 MAGEB6Q8N7X4 407 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 TUBB2BQ9BVA1 445 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 FAM169AQ9Y6X4 670 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 GSCP56915 257 aaPredicted RBP21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 CTDSPL2Q05D32 466 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 USP49Q70CQ1 688 aa21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 RNF26Q9BY78 433 aaPredicted RBP21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
HERPUD2-201ENST00000311350 MYBL2P10244 700 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 CD44P16070 742 aaKnown RBP21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 GPTP24298 496 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 MNAT1P51948 309 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 TUBB4BP68371 445 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 TTC19Q6DKK2 380 aaPredicted RBP21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 SLF1Q9BQI6 1058 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 TFR2Q9UP52 801 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 AGPSO00116 658 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 PBX1P40424 430 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 SPATA1Q5VX52 437 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 SH3RF1Q7Z6J0 888 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 CEP89Q96ST8 783 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 MMS19Q96T76 1030 aa21.2■□□□□ 0.98
HERPUD2-201ENST00000311350 RTL9Q8NET4 1388 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 USP14P54578 494 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 DDR1Q08345 913 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 STIM1Q13586 685 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 SMYD4Q8IYR2 804 aaPredicted RBP21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 CCDC148Q8NFR7 591 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 CTAGE1Q96RT6 745 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 ADD3Q9UEY8 706 aaKnown RBP21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 PCDHB6Q9Y5E3 794 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 YBX3P16989 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 TM4SF1P30408 202 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 IRAK1P51617 712 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 FANCBQ8NB91 859 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 ARMT1Q9H993 441 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 VIPAS39Q9H9C1 493 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 ANAPC4Q9UJX5 808 aa21.19■□□□□ 0.98
HERPUD2-201ENST00000311350 XBP1P17861 261 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 FECHP22830 423 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 RASGRF1Q13972 1273 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 INCENPQ9NQS7 918 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 TTF2Q9UNY4 1162 aaKnown RBP21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 CCT6AP40227 531 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms