RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 KCTD16Q68DU8 428 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
RUNX3-201ENST00000308873 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 FAM71BQ8TC56 605 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 NOC4LQ9BVI4 516 aaKnown RBP16.61■□□□□ 0.25
RUNX3-201ENST00000308873 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
RUNX3-201ENST00000308873 GTPBP6O43824 516 aaPredicted RBP16.6■□□□□ 0.25
RUNX3-201ENST00000308873 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
RUNX3-201ENST00000308873 CCDC51Q96ER9 411 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 CCT5P48643 541 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 TRIM28Q13263 835 aaKnown RBP16.6■□□□□ 0.25
RUNX3-201ENST00000308873 TTC31Q49AM3 519 aaPredicted RBP16.6■□□□□ 0.25
RUNX3-201ENST00000308873 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 EHD2Q9NZN4 543 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 BMP15O95972 392 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 SCG2P13521 617 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 ALX1Q15699 326 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
RUNX3-201ENST00000308873 GOLGA6CA6NDK9 693 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 EIF3CLB5ME19 914 aaKnown RBP16.59■□□□□ 0.25
RUNX3-201ENST00000308873 TULP2O00295 520 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 GOLGA6DP0CG33 693 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 LIG3P49916 1009 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 DYMQ7RTS9 669 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 EIF3CQ99613 913 aaKnown RBP16.59■□□□□ 0.25
RUNX3-201ENST00000308873 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 GOLGA6AQ9NYA3 693 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 LRWD1Q9UFC0 647 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 H0YHG0 523 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 BUB1O43683 1085 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 ATP1A2P50993 1020 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 KRT83P78385 493 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
RUNX3-201ENST00000308873 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 EHD4Q9H223 541 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 ZHX3Q9H4I2 956 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 HAUS4Q9H6D7 363 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 EXOC1Q9NV70 894 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 GOLGA6BA6NDN3 693 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 ATP6V1AP38606 617 aa16.59■□□□□ 0.25
RUNX3-201ENST00000308873 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.25
RUNX3-201ENST00000308873 TICAM2Q86XR7 235 aa16.58■□□□□ 0.25
RUNX3-201ENST00000308873 FAM76AQ8TAV0 307 aa16.58■□□□□ 0.25
RUNX3-201ENST00000308873 MTRQ99707 1265 aa16.58■□□□□ 0.25
RUNX3-201ENST00000308873 SLC39A2Q9NP94 309 aa16.58■□□□□ 0.25
RUNX3-201ENST00000308873 PRPF3O43395 683 aaKnown RBP16.58■□□□□ 0.24
RUNX3-201ENST00000308873 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.24
RUNX3-201ENST00000308873 USP5P45974 858 aa16.58■□□□□ 0.24
RUNX3-201ENST00000308873 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.24
RUNX3-201ENST00000308873 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
RUNX3-201ENST00000308873 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
RUNX3-201ENST00000308873 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
RUNX3-201ENST00000308873 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 GTF2A1P52655 376 aaPredicted RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 E2F4Q16254 413 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 NHEJ1Q9H9Q4 299 aaPredicted RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 SECISBP2LQ93073 1101 aaKnown RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 TCP11L1Q9NUJ3 509 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 MOCS3O95396 460 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 MYBL2P10244 700 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 TFAP4Q01664 338 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 LRRC31Q6UY01 552 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 STAG2Q8N3U4 1231 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 CDK5RAP3Q96JB5 506 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 SELENOOQ9BVL4 669 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 RBM28Q9NW13 759 aaKnown RBP16.57■□□□□ 0.24
RUNX3-201ENST00000308873 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
RUNX3-201ENST00000308873 H7C1D1 291 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 NCK2O43639 380 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 USP14P54578 494 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 SF3A3Q12874 501 aaKnown RBP eCLIP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 TMTC3Q6ZXV5 915 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 GPATCH11Q8N954 259 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 CNOT6LQ96LI5 555 aaKnown RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
RUNX3-201ENST00000308873 FCER1AP12319 257 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 TECP42680 631 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 PDE4CQ08493 712 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 TRIM14Q14142 442 aa16.56■□□□□ 0.24
RUNX3-201ENST00000308873 IL17AQ16552 155 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms