RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CALML3P27482 149 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 CYLC1P35663 651 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 ATP2C1P98194 919 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 TROAPQ12815 778 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 ZNF444Q8N0Y2 327 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 CDK5RAP3Q96JB5 506 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 MMRN2Q9H8L6 949 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
SNCAIP-202ENST00000261368 TSPY3P0CV98 308 aa18.14■□□□□ 0.5
SNCAIP-202ENST00000261368 TSPY8P0CW00 308 aa18.14■□□□□ 0.5
SNCAIP-202ENST00000261368 BEND6Q5SZJ8 279 aaPredicted RBP18.14■□□□□ 0.5
SNCAIP-202ENST00000261368 DYNLL2Q96FJ2 89 aa18.14■□□□□ 0.5
SNCAIP-202ENST00000261368 PRDX5P30044 214 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 TRIM14Q14142 442 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 ELOA2Q8IYF1 753 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 PYM1Q9BRP8 204 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 NOC4LQ9BVI4 516 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 TRIM66O15016 1216 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 MAP9Q49MG5 647 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
SNCAIP-202ENST00000261368 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 AKR1B10O60218 316 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 KIF5AQ12840 1032 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 PNMA1Q8ND90 353 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 EXOC4Q96A65 974 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 FAM204AQ9H8W3 233 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 FAM207AQ9NSI2 230 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 H7C1D1 291 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 ATP1A1P05023 1023 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 NAPAP54920 295 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 KRT83P78385 493 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 PPARDQ03181 441 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 RUFY1Q96T51 708 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 MECOMQ03112 1051 aa18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
SNCAIP-202ENST00000261368 ADAMTS3O15072 1205 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 DDAH1O94760 285 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 KLK7P49862 253 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 RIN2Q8WYP3 895 aaPredicted RBP18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 ACTN2P35609 894 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 TDRD12Q587J7 1177 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 APTXQ7Z2E3 356 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 MB21D1Q8N884 522 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 HPS3Q969F9 1004 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 ANKIB1Q9P2G1 1089 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 KCPQ6ZWJ8 1503 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 USP17L3A6NCW0 530 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 USP17L4A6NCW7 530 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 KLRK1P26718 216 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 DYMQ7RTS9 669 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 USP17L1Q7RTZ2 530 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 SPATA20Q8TB22 786 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 AGPAT5Q9NUQ2 364 aa18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 LIMA1Q9UHB6 759 aaKnown RBP18.12■□□□□ 0.49
SNCAIP-202ENST00000261368 ATRNO75882 1429 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 SEMA3EO15041 775 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 ZNF185O15231 689 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 HIBADHP31937 336 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 SIK1P57059 783 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 DDB1Q16531 1140 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 MMS19Q96T76 1030 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 ZHX3Q9H4I2 956 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 HAUS4Q9H6D7 363 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 TUBB2AQ13885 445 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 TUBB2BQ9BVA1 445 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 RASSF4Q9H2L5 321 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 DISC1Q9NRI5 854 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 ATP2B2Q01814 1243 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 SH3RF1Q7Z6J0 888 aa18.11■□□□□ 0.49
SNCAIP-202ENST00000261368 CXCR5P32302 372 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 TECP42680 631 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 C2orf54Q08AI8 447 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 CACNA2D4Q7Z3S7 1137 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 RIOK1Q9BRS2 568 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 TMEM60Q9H2L4 133 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 SLC39A2Q9NP94 309 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 DCP1AQ9NPI6 582 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 ZPR1O75312 459 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 LONP1P36776 959 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 TXKP42681 527 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 CABP7Q86V35 215 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms