RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 UBXN1Q04323 297 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 UBE2SQ16763 222 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 NBPF10Q6P3W6 841 aaKnown RBP7.11□□□□□ -1.27
BRIP1-201ENST00000259008 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 TMEM179Q6ZVK1 233 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 NBPF15Q8N660 670 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 RPAP3Q9H6T3 665 aaPredicted RBP7.11□□□□□ -1.27
BRIP1-201ENST00000259008 MST1RQ04912 1400 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 PLEKHG2Q9H7P9 1386 aa7.11□□□□□ -1.27
BRIP1-201ENST00000259008 USP42Q9H9J4 1324 aaKnown RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 A0A1B0GVL5 298 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 EXOC3O60645 756 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 LRMPQ12912 555 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 EPHA10Q5JZY3 1008 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 LRCH2Q5VUJ6 765 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 LMTK2Q8IWU2 1503 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 DDAH1O94760 285 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 TFDP1Q14186 410 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 RILPL1Q5EBL4 403 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 FANCBQ8NB91 859 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 ALS2CR12Q96Q35 445 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 CD2APQ9Y5K6 639 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MYO3AQ8NEV4 1616 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 AKR1B10O60218 316 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 CD19P15391 556 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 GABPAQ06546 454 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 DMP1Q13316 513 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 GPATCH4Q5T3I0 446 aaKnown RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 KRT40Q6A162 431 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 GPBP1Q86WP2 473 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MAK16Q9BXY0 300 aaKnown RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 BLZF1Q9H2G9 400 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 INO80B-WBP1J3KQ70 363 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 CASQ1P31415 396 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MCM4P33991 863 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 CYP2J2P51589 502 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MAP1SQ66K74 1059 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 SLFN12Q8IYM2 578 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 RASGRP4Q8TDF6 673 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 STAMQ92783 540 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 PARK7Q99497 189 aaKnown RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 INO80BQ9C086 356 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 PCDHA12Q9UN75 941 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 MROH7-TTC4A0A0A0MT08 1334 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 KIF5CO60282 957 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 FAM160B2Q86V87 743 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 SMC5Q8IY18 1101 aa7.1□□□□□ -1.27
BRIP1-201ENST00000259008 TTC12Q9H892 705 aaPredicted RBP7.1□□□□□ -1.27
BRIP1-201ENST00000259008 ITSN1Q15811 1721 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 SCG2P13521 617 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 GYS1P13807 737 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 UBE2HP62256 183 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 GSTA5Q7RTV2 222 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 TBC1D32Q96NH3 1257 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 INPP5FQ9Y2H2 1132 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 JAK2O60674 1132 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 IGKV5-2P06315 115 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 OSTNP61366 133 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 CNNM4Q6P4Q7 775 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 ZNF70Q9UC06 446 aaPredicted RBP7.09□□□□□ -1.27
BRIP1-201ENST00000259008 DENND3A2RUS2 1198 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 CCDC85CA6NKD9 419 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 POLR2DO15514 142 aaKnown RBP7.09□□□□□ -1.27
BRIP1-201ENST00000259008 VEGFAP15692 232 aaPredicted RBP7.09□□□□□ -1.27
BRIP1-201ENST00000259008 PLCB3Q01970 1234 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 SLC44A5Q8NCS7 719 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 UBASH3AP57075 661 aa7.09□□□□□ -1.27
BRIP1-201ENST00000259008 ZRSR2Q15696 482 aaKnown RBP7.09□□□□□ -1.27
BRIP1-201ENST00000259008 TNNC2P02585 160 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 ATF7P17544 494 aaPredicted RBP7.08□□□□□ -1.28
BRIP1-201ENST00000259008 STRIP1Q5VSL9 837 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 NEK8Q86SG6 692 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 AOPEPQ8N6M6 819 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 RIOK1Q9BRS2 568 aaKnown RBP7.08□□□□□ -1.28
BRIP1-201ENST00000259008 TMEM39BQ9GZU3 492 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 GPR108Q9NPR9 543 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
BRIP1-201ENST00000259008 DACT1Q9NYF0 836 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 FEM1BQ9UK73 627 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 FRMPD1Q5SYB0 1578 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 SRGAP2CP0DJJ0 459 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 ADD1P35611 737 aaKnown RBP7.08□□□□□ -1.28
BRIP1-201ENST00000259008 PPP2R5BQ15173 497 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 LONRF3Q496Y0 759 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 ANO6Q4KMQ2 910 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 KIFAP3Q92845 792 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 TRMT1Q9NXH9 659 aaKnown RBP7.08□□□□□ -1.28
BRIP1-201ENST00000259008 TTLL3Q9Y4R7 772 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 NRXN1Q9ULB1 1477 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
BRIP1-201ENST00000259008 P4HA1P13674 534 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms