RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LETM2Q2VYF4 491 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 HDAC7Q8WUI4 952 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 MLXIPQ9HAP2 919 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 MCM9Q9NXL9 1143 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 LRWD1Q9UFC0 647 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
SGPP1-201ENST00000247225 EIF3CLB5ME19 914 aaKnown RBP18.9■□□□□ 0.62
SGPP1-201ENST00000247225 NCK2O43639 380 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 BUB1O43683 1085 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 IFT81Q8WYA0 676 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 CCDC42Q96M95 316 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 EIF3CQ99613 913 aaKnown RBP18.9■□□□□ 0.62
SGPP1-201ENST00000247225 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
SGPP1-201ENST00000247225 LRRC31Q6UY01 552 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 DTHD1Q6ZMT9 781 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 STAG2Q8N3U4 1231 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 PROCA1Q8NCQ7 364 aaPredicted RBP18.9■□□□□ 0.62
SGPP1-201ENST00000247225 DYNLL2Q96FJ2 89 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 PHF20Q9BVI0 1012 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 AKR1B10O60218 316 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 PDE4DQ08499 809 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 C2CD5Q86YS7 1000 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 SLC39A2Q9NP94 309 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
SGPP1-201ENST00000247225 SPA17Q15506 151 aa18.89■□□□□ 0.62
SGPP1-201ENST00000247225 RUFY1Q96T51 708 aa18.89■□□□□ 0.62
SGPP1-201ENST00000247225 NOC4LQ9BVI4 516 aaKnown RBP18.89■□□□□ 0.62
SGPP1-201ENST00000247225 TMEM60Q9H2L4 133 aa18.89■□□□□ 0.62
SGPP1-201ENST00000247225 KRT86O43790 486 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 MB21D1Q8N884 522 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 ESYT3A0FGR9 886 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 PDE2AO00408 941 aaPredicted RBP18.89■□□□□ 0.61
SGPP1-201ENST00000247225 PSMA7O14818 248 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 FCER1AP12319 257 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 GNAT2P19087 354 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 KIF5AQ12840 1032 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 TDRD12Q587J7 1177 aaKnown RBP18.89■□□□□ 0.61
SGPP1-201ENST00000247225 RRP36Q96EU6 259 aaKnown RBP18.89■□□□□ 0.61
SGPP1-201ENST00000247225 TUBGCP2Q9BSJ2 902 aa18.89■□□□□ 0.61
SGPP1-201ENST00000247225 GTPBP6O43824 516 aaPredicted RBP18.88■□□□□ 0.61
SGPP1-201ENST00000247225 MOCS3O95396 460 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 IVLP07476 585 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 SCG2P13521 617 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 ALX1Q15699 326 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 TMC4Q7Z404 712 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 ZHX3Q9H4I2 956 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 MKNK2Q9HBH9 465 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
SGPP1-201ENST00000247225 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 KLRK1P26718 216 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 ATP6V1AP38606 617 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 SPAG1Q07617 926 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 PDE4CQ08493 712 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
SGPP1-201ENST00000247225 CADPS2Q86UW7 1296 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 GPATCH11Q8N954 259 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 FAM71BQ8TC56 605 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 NHEJ1Q9H9Q4 299 aaPredicted RBP18.88■□□□□ 0.61
SGPP1-201ENST00000247225 NLRC4Q9NPP4 1024 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 RWDD2AQ9UIY3 292 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 ABCC12Q96J65 1359 aa18.88■□□□□ 0.61
SGPP1-201ENST00000247225 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
SGPP1-201ENST00000247225 USP17L8P0C7I0 530 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 HERVK_113P62684 666 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 TTC31Q49AM3 519 aaPredicted RBP18.87■□□□□ 0.61
SGPP1-201ENST00000247225 CCDC152Q4G0S7 254 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 KAT14Q9H8E8 782 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 USP17L3A6NCW0 530 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 USP17L4A6NCW7 530 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 GOLGA6CA6NDK9 693 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 GOLGA6DP0CG33 693 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
SGPP1-201ENST00000247225 USP17L1Q7RTZ2 530 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 GOLGA6AQ9NYA3 693 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 TBC1D7Q9P0N9 293 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 GOLGA6BA6NDN3 693 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
SGPP1-201ENST00000247225 PBX1P40424 430 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 TFAP4Q01664 338 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 LRRC41Q15345 812 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 SEC23AQ15436 765 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 CCDC70Q6NSX1 233 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 SLC44A5Q8NCS7 719 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 MSANTD4Q8NCY6 345 aa18.87■□□□□ 0.61
SGPP1-201ENST00000247225 FAM205AQ6ZU69 1335 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
SGPP1-201ENST00000247225 TECP42680 631 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 GTF2A1P52655 376 aaPredicted RBP18.86■□□□□ 0.61
SGPP1-201ENST00000247225 TROAPQ12815 778 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 CAVIN4Q5BKX8 364 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 MUM1L1Q5H9M0 696 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 SELENOOQ9BVL4 669 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 CYLC1P35663 651 aaPredicted RBP18.86■□□□□ 0.61
SGPP1-201ENST00000247225 USP5P45974 858 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
SGPP1-201ENST00000247225 USP14P54578 494 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms