RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
PTK7-202ENST00000230419 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
PTK7-202ENST00000230419 TNIP1Q15025 636 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 RDH13Q8NBN7 331 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 RBL2Q08999 1139 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 C2CD5Q86YS7 1000 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 DHX40Q8IX18 779 aaKnown RBP18.71■□□□□ 0.59
PTK7-202ENST00000230419 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 TRIM49BA6NDI0 452 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 CTNNBL1Q8WYA6 563 aaPredicted RBP18.71■□□□□ 0.59
PTK7-202ENST00000230419 PEAK1Q9H792 1746 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 CDR1P51861 262 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 PLA2G4DQ86XP0 818 aa18.71■□□□□ 0.59
PTK7-202ENST00000230419 NTSR2O95665 410 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 RRAGAQ7L523 313 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 HPS3Q969F9 1004 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 TEX33O43247 280 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 MRPS25P82663 173 aaKnown RBP18.7■□□□□ 0.58
PTK7-202ENST00000230419 CUL4BQ13620 913 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 SRBD1Q8N5C6 995 aaKnown RBP18.7■□□□□ 0.58
PTK7-202ENST00000230419 GJA10Q969M2 543 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 JAKMIP2Q96AA8 810 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 TMEM110-MUSTN1A8MSY1 372 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 SLFN14P0C7P3 912 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 IQCB1Q15051 598 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 STAG1Q8WVM7 1258 aa18.7■□□□□ 0.58
PTK7-202ENST00000230419 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 IRX2Q9BZI1 471 aaPredicted RBP18.69■□□□□ 0.58
PTK7-202ENST00000230419 B4DLN1 442 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 CAPN2P17655 700 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
PTK7-202ENST00000230419 FAM13AO94988 1023 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 OR52Z1P0C646 297 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 PTPREP23469 700 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 EHBP1Q8NDI1 1231 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 RGS22Q8NE09 1264 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 SRPRBQ9Y5M8 271 aaKnown RBP18.69■□□□□ 0.58
PTK7-202ENST00000230419 DDAH1O94760 285 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 ERLIN2O94905 339 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 TMTC1Q8IUR5 882 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 TBCKQ8TEA7 893 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 PAGE5Q96GU1 130 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
PTK7-202ENST00000230419 XDHP47989 1333 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
PTK7-202ENST00000230419 RESP18Q5W5W9 173 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 NEK8Q86SG6 692 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 LRRC27Q9C0I9 530 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 TMEM260Q9NX78 707 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 KANSL2Q9H9L4 492 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 IKBKBO14920 756 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 IFFO1Q0D2I5 559 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 SLC51AQ86UW1 340 aa18.68■□□□□ 0.58
PTK7-202ENST00000230419 ZMYND10O75800 440 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 CDK8P49336 464 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 MTF1Q14872 753 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
PTK7-202ENST00000230419 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 USP17L5A8MUK1 530 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 MEIS1O00470 390 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
PTK7-202ENST00000230419 COPB1P53618 953 aaKnown RBP18.67■□□□□ 0.58
PTK7-202ENST00000230419 SETQ01105 290 aaPredicted RBP18.67■□□□□ 0.58
PTK7-202ENST00000230419 PRR16Q569H4 304 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 OR8K1Q8NGG5 319 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 KIFC2Q96AC6 838 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 TIGD1Q96MW7 591 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 RSPH14Q9UHP6 348 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 CCDC65Q8IXS2 484 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 KCNB2Q92953 911 aa18.67■□□□□ 0.58
PTK7-202ENST00000230419 UBR1Q8IWV7 1749 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 MAGEA1P43355 309 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 TMTC3Q6ZXV5 915 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 RAD17O75943 681 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 FMR1Q06787 632 aaKnown RBP eCLIP18.66■□□□□ 0.58
PTK7-202ENST00000230419 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 VSTM4Q8IW00 320 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 SLC35F6Q8N357 371 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 OVOS2A0A0G2JMS6 1433 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
PTK7-202ENST00000230419 CD209Q9NNX6 404 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 MYO6Q9UM54 1294 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 CYP27A1Q02318 531 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
PTK7-202ENST00000230419 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
PTK7-202ENST00000230419 PLA2G12BQ9BX93 195 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 PCDHB13Q9Y5F0 798 aa18.66■□□□□ 0.58
PTK7-202ENST00000230419 PPIP5K2O43314 1243 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 PRPF3O43395 683 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms