RNA–Protein interactions for RNA: ENSMUST00000020776.4

Ccdc117-201, Transcript of Coiled-coil domain-containing protein 117, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc117, Length 3,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc117-201ENSMUST00000020776 Ppef2O35385 757 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Calm1P0DP26 149 aaKnown RBP16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Calm2P0DP27 149 aaKnown RBP16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Calm3P0DP28 149 aaKnown RBP16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Msh3P13705 1091 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ptpn12P35831 775 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tmtc1Q3UV71 942 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Brinp3Q499E0 766 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Kif13bA0A286YCV9 1847 aa16.24■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Gm36210A0A1B0GS00 229 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ankrd63A2ARS0 390 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Arhgap6O54834 987 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Sik1Q60670 779 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ctdp1Q7TSG2 960 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Cdk17Q8K0D0 523 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Kifc2O08672 792 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Rnf40Q3U319 1001 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tmem192Q9CXT7 266 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Popdc2Q9ES82 367 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 AmfrQ9R049 643 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tmtc2Q56A06 836 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Hook2Q7TMK6 716 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ano2Q8CFW1 1002 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Prl7b1Q8CGZ9 251 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tor1aip1Q921T2 595 aaKnown RBP16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Lgr5Q9Z1P4 907 aa16.23■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 PnnO35691 725 aaKnown RBP16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Pde4dQ01063 747 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 1700013D24RikQ0P521 120 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Rtkn2Q14B46 604 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Rbm15bQ6PHZ5 887 aaKnown RBP16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tmem143Q8VD26 458 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Frmpd4A2AFR3 1320 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Etnk2A7MCT6 385 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Hnrnph3D3Z3N4 346 aaKnown RBP16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Stim2P83093 746 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Top1Q04750 767 aaKnown RBP16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 PRAG1Q571I4 1179 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Slc9a1Q61165 820 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Mettl25Q6NXH8 597 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Eif3cQ8R1B4 911 aaKnown RBP16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 HyiQ8R1F5 277 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 EpgnQ924X1 152 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Sar1bQ9CQC9 198 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Gpaa1Q9WTK3 621 aa16.22■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 ByslO54825 436 aaKnown RBP16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Igbp1Q61249 340 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Sh3gl2Q62420 352 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ubxn6Q99PL6 442 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 CutaQ9CQ89 177 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 A0A0U1RNP2 1173 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Akap2O54931 893 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Wee1P47810 646 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Nol4P60954 483 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Kdm7aQ3UWM4 940 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 MycbpapQ5SUV2 932 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Cfap69Q8BH53 942 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Cep95Q8BVV7 827 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Epha10Q8BYG9 1007 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Ppp1r3gQ9CW07 347 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Tjap1Q9DCD5 539 aa16.21■□□□□ 0.19
Ccdc117-201ENSMUST00000020776 Cyp26c1B2RXA7 518 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Tex13cD3YU32 604 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 1700029H14RikE9PY36 240 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Dnajc21E9Q8D0 531 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ftl1P29391 183 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Pla2g4aP47713 748 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Zmym1Q3TJB1 983 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Psg29Q3URN6 468 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 SowahdQ8BY98 327 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Coro7Q9D2V7 922 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 JcadQ5DTX6 1320 aa16.21■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Api5O35841 504 aaKnown RBP16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Gas1Q01721 343 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ttc14Q9CSP9 761 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Cwc15Q9JHS9 229 aaKnown RBP16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Trp53inp1Q9QXE4 239 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Cyp2c23E9Q5K4 494 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Parp1P11103 1013 aaKnown RBP16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Cnga2Q62398 664 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Esco1Q69Z69 843 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Usp50Q6P8X6 390 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ccdc93Q7TQK5 629 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Trap1Q9CQN1 706 aaKnown RBP16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Lrrc55Q3UY51 311 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ribc1Q9D0B8 379 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 March8Q9DBD2 286 aa16.2■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ddx23D3Z0M9 819 aaKnown RBP16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Ube4aE9Q735 1028 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Vmn2r78K7N6U5 853 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Dctn1O08788 1281 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Smarcc1P97496 1104 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 D130040H23RikQ8BII3 405 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Mmgt1Q8K273 131 aaKnown RBP16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Nol7Q9D7Z3 254 aaKnown RBP16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 FignQ9ERZ6 759 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Mtmr9Q9Z2D0 545 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 RaraP11416 462 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Traf3ip1Q149C2 625 aa16.19■□□□□ 0.18
Ccdc117-201ENSMUST00000020776 Smim5Q8BT42 78 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms