RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Acot9Q9R0X4 439 aaKnown RBP17.66■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Nlrp5Q9R1M5 1163 aa17.66■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Ktn1Q61595 1327 aaKnown RBP17.66■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Usp17ldG5E8G2 545 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Usp17lcG5E8I7 545 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 MycnP03966 462 aaKnown RBP17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Irx3P81067 507 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 DSCC1Q14AI0 399 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Tll1Q62381 1013 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Dock2Q8C3J5 1828 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Dnai2A2AC93 623 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Arhgap4B1AUY3 965 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Hsp90aa1P07901 733 aaKnown RBP17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Cyp2e1Q05421 493 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Pcdhb14Q6PB90 796 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Ddx55Q6ZPL9 600 aaKnown RBP17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Slc4a8Q8JZR6 1089 aa17.65■□□□□ 0.42
Ddx49-201ENSMUST00000008004 Syce3B5KM66 88 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Tph1P17532 447 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 PtpraP18052 829 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Pcmtd1P59913 357 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Tmem109Q3UBX0 243 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Tnni3kQ5GIG6 834 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Haus7Q8BKT8 364 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Bri3bpQ8BXV2 253 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Plcg2Q8CIH5 1265 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 MyripQ8K3I4 856 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Nod2Q8K3Z0 1020 aa17.64■□□□□ 0.41
Ddx49-201ENSMUST00000008004 A0A0U1RNP2 1173 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 EporP14753 507 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gna11P21278 359 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Prl2c1Q5SVL9 228 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Slc5a5Q99PN0 618 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Snw1Q9CSN1 536 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Trpm7Q923J1 1863 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kansl3A2RSY1 903 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kif4P33174 1231 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Siah1bQ06985 282 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 C87499Q3UX49 493 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ccdc84Q4VA36 332 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Abhd15Q5F2F2 459 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Madcam1Q61826 405 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Cnga2Q62398 664 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Trpv1Q704Y3 839 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Peg10Q7TN75 958 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gga3Q8BMI3 718 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Zhx2Q8C0C0 836 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Sapcd2Q9D818 391 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Zcchc17Q9ESX4 241 aaKnown RBP17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Azi2Q9QYP6 405 aa17.63■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Nme9A0A1L1SUL6 329 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 LdhbP16125 334 aaKnown RBP17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 PparaP23204 468 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gtf2f1Q3THK3 508 aaKnown RBP17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Cnksr2Q80YA9 1032 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Arpp21Q9DCB4 807 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Dicer1Q8R418 1916 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gm7356A0A087WSA6 508 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Api5O35841 504 aaKnown RBP17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kcna3P16390 528 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Plekha7Q3UIL6 1118 aaKnown RBP17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Morc2bQ8C5W4 1022 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Angel2Q8K1C0 544 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Trim11Q99PQ2 467 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 4931400O07RikQ9D4M5 137 aa17.62■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Usp34Q6ZQ93 3582 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Mcm3P25206 812 aaKnown RBP17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 GabpaQ00422 454 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Rnf180Q3U827 592 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Adgre1Q61549 931 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Fbxo11Q7TPD1 930 aaKnown RBP17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gprasp2Q8BUY8 826 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kiaa1024Q8K3V7 917 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Tesk2Q8VCT9 570 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ifi202Q9R002 445 aa17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 IkQ9Z1M8 557 aaKnown RBP17.61■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gm43638A0A0J9YU36 694 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Cyp26c1B2RXA7 518 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Oog1E9Q5G7 496 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kif3aP28741 701 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Slc10a4Q3UEZ8 437 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Stxbp3Q60770 592 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Sv2cQ69ZS6 727 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 IqcgQ80W32 419 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Pspc1Q8R326 523 aaKnown RBP17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Kctd10Q922M3 315 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 PdgfdQ925I7 370 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ubiad1Q9DC60 336 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Igf2rQ07113 2483 aaKnown RBP17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ankrd35E9Q9D8 996 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Trappc10Q3TLI0 1259 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ttll12Q3UDE2 639 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Casc1Q6TDU8 730 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Znf653Q6YND2 615 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Brd2Q7JJ13 798 aaKnown RBP17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Tas2r124Q7M718 309 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Gpatch3Q8BIY1 525 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Ccdc88cQ6VGS5 2009 aa17.6■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Mms22lB1AUR6 1238 aa17.59■□□□□ 0.41
Ddx49-201ENSMUST00000008004 Cfap58B2RW38 873 aa17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms