RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	RRF1	P38771	230 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	NUP60	P39705	539 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	DOT6	P40059	670 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	ALG5	P40350	334 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	PRM2	P40534	656 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	VMA13	P41807	478 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	TRM112	P53738	135 aa	Predicted RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	DUS1	P53759	423 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	GCN5	Q03330	439 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	ACL4	Q03771	387 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YMR155W	Q03795	547 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	TVP15	Q03860	143 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	NHX1	Q04121	633 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	MGR3	Q04472	501 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	AIM32	Q04689	311 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	LCB5	Q06147	687 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	RSC3	Q06639	885 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	RTT10	Q08924	1013 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	LEA1	Q08963	238 aa	Predicted RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	YPR202W	Q08993	238 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	MCD1	Q12158	566 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	OCA6	Q12454	224 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	APM4	Q99186	491 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	INO1	P11986	533 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	GLN4	P13188	809 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SSB2	YNL209W	NSP1	P14907	823 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	RGR1	P19263	1082 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	ATP12	P22135	325 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	KRE6	P32486	720 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	SMI1	P32566	505 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	RSM22	P36056	628 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	CUE2	P36075	443 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	ATG12	P38316	186 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YHR131C	P38835	850 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YHR202W	P38887	602 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YHB1	P39676	399 aa	Known RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	YJL070C	P40361	888 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YJL132W	P47014	750 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	AIF1	P52923	378 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	YGR067C	P53243	804 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	TRS31	Q03337	283 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	HER2	Q03557	464 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	ECM22	Q05958	814 aa	Predicted RBP	4.67	□□□□□ -1.66
SSB2	YNL209W	SRF1	Q12516	437 aa		4.67	□□□□□ -1.66
SSB2	YNL209W	COX6	P00427	148 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	ARG81	P05085	880 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	MPH2	P0CD99	609 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	RSR1	P13856	272 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	MSD1	P15179	658 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	ART10	P18634	518 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	HSP60	P19882	572 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	DSS4	P32601	143 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	SLX5	P32828	619 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	SRP101	P32916	621 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	PEX6	P33760	1030 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	HES1	P35843	434 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	LDH1	P38139	375 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	MIG2	P53035	382 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	TEL2	P53038	688 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	MPS2	P53159	387 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	RCF2	P53721	224 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	SIW14	P53965	281 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	RLI1	Q03195	608 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	HAS1	Q03532	505 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	TAF12	Q03761	539 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	ENT5	Q03769	411 aa	Known RBP	4.66	□□□□□ -1.66
SSB2	YNL209W	CRN1	Q06440	651 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	MED4	Q12343	284 aa		4.66	□□□□□ -1.66
SSB2	YNL209W	PRC1	P00729	532 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	GAL1	P04385	528 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	RHO2	P06781	192 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	MAS1	P10507	462 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	HEM12	P32347	362 aa	Predicted RBP	4.65	□□□□□ -1.66
SSB2	YNL209W	BIO2	P32451	375 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	SPR1	P32603	445 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	VPS51	P36116	164 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	HMT1	P38074	348 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	IFA38	P38286	347 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	TSC10	P38342	320 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	FRT2	P39734	528 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	YEL023C	P39992	682 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	STB1	P42845	420 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
SSB2	YNL209W	RPN9	Q04062	393 aa	Known RBP	4.65	□□□□□ -1.66
SSB2	YNL209W	GPN2	Q08726	347 aa	Predicted RBP	4.65	□□□□□ -1.66
SSB2	YNL209W	LCB4	Q12246	624 aa		4.65	□□□□□ -1.66
SSB2	YNL209W	MIS1	P09440	975 aa	Known RBP	4.65	□□□□□ -1.67
SSB2	YNL209W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
SSB2	YNL209W	PRP6	P19735	899 aa	Predicted RBP	4.65	□□□□□ -1.67
SSB2	YNL209W	SAN1	P22470	610 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	AMD2	P22580	549 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	CLB3	P24870	427 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	MET22	P32179	357 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	SIN4	P32259	974 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	RIM1	P32445	135 aa	Known RBP	4.65	□□□□□ -1.67
SSB2	YNL209W	ASF2	P32448	525 aa	Predicted RBP	4.65	□□□□□ -1.67
SSB2	YNL209W	VPH1	P32563	840 aa	Known RBP	4.65	□□□□□ -1.67
SSB2	YNL209W	PEP7	P32609	515 aa		4.65	□□□□□ -1.67
SSB2	YNL209W	ATO2	P32907	282 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms