RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RRT6P53117 311 aaPredicted RBP3.83□□□□□ -1.8
ECM16YMR128W ORC3P54790 616 aa3.83□□□□□ -1.8
ECM16YMR128W TMA20P89886 181 aaPredicted RBP3.83□□□□□ -1.8
ECM16YMR128W SLU7Q02775 382 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W CSN9Q03981 162 aa3.83□□□□□ -1.8
ECM16YMR128W PLP1Q04004 230 aa3.83□□□□□ -1.8
ECM16YMR128W YOL159CQ08300 171 aa3.83□□□□□ -1.8
ECM16YMR128W VIK1Q12045 647 aa3.83□□□□□ -1.8
ECM16YMR128W GPR1Q12361 961 aa3.83□□□□□ -1.8
ECM16YMR128W CLB2P24869 491 aa3.82□□□□□ -1.8
ECM16YMR128W SEC1P30619 724 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W CSE1P33307 960 aa3.82□□□□□ -1.8
ECM16YMR128W PTH2P34222 208 aa3.82□□□□□ -1.8
ECM16YMR128W MOT2P34909 587 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W DBP7P36120 742 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W PCM1P38628 557 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W SSZ1P38788 538 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W CKB2P38930 258 aa3.82□□□□□ -1.8
ECM16YMR128W HLJ1P48353 224 aa3.82□□□□□ -1.8
ECM16YMR128W PSP2P50109 593 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W LYS5P50113 272 aa3.82□□□□□ -1.8
ECM16YMR128W ATP22P50273 684 aaPredicted RBP3.82□□□□□ -1.8
ECM16YMR128W YGR054WP53235 642 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
ECM16YMR128W MMT1Q03218 510 aa3.82□□□□□ -1.8
ECM16YMR128W YDR239CQ03780 787 aa3.82□□□□□ -1.8
ECM16YMR128W SPH1Q06160 661 aa3.82□□□□□ -1.8
ECM16YMR128W SHS1Q07657 551 aa3.82□□□□□ -1.8
ECM16YMR128W YEH2Q07950 538 aa3.82□□□□□ -1.8
ECM16YMR128W VPS5Q92331 675 aa3.82□□□□□ -1.8
ECM16YMR128W YER152CP10356 443 aa3.82□□□□□ -1.8
ECM16YMR128W CBS2P14905 389 aa3.82□□□□□ -1.8
ECM16YMR128W HSP26P15992 214 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
ECM16YMR128W SAC1P32368 623 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W NGG1P32494 702 aa3.82□□□□□ -1.8
ECM16YMR128W HSP78P33416 811 aa3.82□□□□□ -1.8
ECM16YMR128W ABZ1P37254 787 aaPredicted RBP3.82□□□□□ -1.8
ECM16YMR128W PRM2P40534 656 aa3.82□□□□□ -1.8
ECM16YMR128W STB2P46679 850 aa3.82□□□□□ -1.8
ECM16YMR128W HXT16P47185 567 aa3.82□□□□□ -1.8
ECM16YMR128W AIF1P52923 378 aa3.82□□□□□ -1.8
ECM16YMR128W PEX8P53248 589 aa3.82□□□□□ -1.8
ECM16YMR128W YMR155WQ03795 547 aa3.82□□□□□ -1.8
ECM16YMR128W DYN3Q04949 312 aa3.82□□□□□ -1.8
ECM16YMR128W FMP42Q04991 504 aa3.82□□□□□ -1.8
ECM16YMR128W ARP9Q05123 467 aa3.82□□□□□ -1.8
ECM16YMR128W MRL1Q06815 381 aa3.82□□□□□ -1.8
ECM16YMR128W NOP12Q08208 459 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W SLF1Q12034 447 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W APM4Q99186 491 aa3.82□□□□□ -1.8
ECM16YMR128W RGS2Q99188 309 aa3.82□□□□□ -1.8
ECM16YMR128W ART10P18634 518 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W GBP2P25555 427 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
ECM16YMR128W RPT5P33297 434 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W MRP8P35719 219 aa3.82□□□□□ -1.8
ECM16YMR128W VID24P38263 362 aa3.82□□□□□ -1.8
ECM16YMR128W VMA22P38784 181 aa3.82□□□□□ -1.8
ECM16YMR128W PCF11P39081 626 aaPredicted RBP3.82□□□□□ -1.8
ECM16YMR128W SEO1P39709 593 aa3.82□□□□□ -1.8
ECM16YMR128W SAH1P39954 449 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W DOT1Q04089 582 aaKnown RBP3.82□□□□□ -1.8
ECM16YMR128W YPR172WQ06608 200 aa3.82□□□□□ -1.8
ECM16YMR128W KCS1Q12494 1050 aa3.82□□□□□ -1.8
ECM16YMR128W ATG11Q12527 1178 aa3.82□□□□□ -1.8
ECM16YMR128W ERG20P08524 352 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W NAR1P23503 491 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W BUD23P25627 275 aaPredicted RBP3.81□□□□□ -1.8
ECM16YMR128W FES1P38260 290 aa3.81□□□□□ -1.8
ECM16YMR128W SWD1P39706 426 aa3.81□□□□□ -1.8
ECM16YMR128W ACA1P39970 489 aa3.81□□□□□ -1.8
ECM16YMR128W IRC6P43615 237 aa3.81□□□□□ -1.8
ECM16YMR128W YGL036WP53185 909 aaPredicted RBP3.81□□□□□ -1.8
ECM16YMR128W SOL4P53315 255 aa3.81□□□□□ -1.8
ECM16YMR128W TRM44Q02648 567 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W MGR3Q04472 501 aa3.81□□□□□ -1.8
ECM16YMR128W YLR455WQ06188 304 aa3.81□□□□□ -1.8
ECM16YMR128W PMT7Q06644 662 aa3.81□□□□□ -1.8
ECM16YMR128W LOT6Q07923 191 aa3.81□□□□□ -1.8
ECM16YMR128W DIS3Q08162 1001 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W RHO2P06781 192 aa3.81□□□□□ -1.8
ECM16YMR128W PUT2P07275 575 aa3.81□□□□□ -1.8
ECM16YMR128W ABF1P14164 731 aa3.81□□□□□ -1.8
ECM16YMR128W ASK1P35734 292 aa3.81□□□□□ -1.8
ECM16YMR128W MCR1P36060 302 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W DLD3P39976 496 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W SNU56Q03782 492 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W SEC10Q06245 871 aa3.81□□□□□ -1.8
ECM16YMR128W CDD1Q06549 142 aa3.81□□□□□ -1.8
ECM16YMR128W VPS54Q12071 889 aa3.81□□□□□ -1.8
ECM16YMR128W PSY3Q12318 242 aa3.81□□□□□ -1.8
ECM16YMR128W HRT3Q12347 344 aa3.81□□□□□ -1.8
ECM16YMR128W RRP36Q12481 300 aaPredicted RBP3.81□□□□□ -1.8
ECM16YMR128W TY4B-PA0A0B7P3V8 1104 aa3.81□□□□□ -1.8
ECM16YMR128W RPN13O13563 156 aa3.81□□□□□ -1.8
ECM16YMR128W ERS1P17261 260 aa3.81□□□□□ -1.8
ECM16YMR128W COX11P19516 300 aaKnown RBP3.81□□□□□ -1.8
ECM16YMR128W DIT1P21623 536 aa3.81□□□□□ -1.8
ECM16YMR128W SPB1P25582 841 aaPredicted RBP3.81□□□□□ -1.8
ECM16YMR128W URA10P30402 227 aa3.81□□□□□ -1.8
ECM16YMR128W CYS4P32582 507 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms