RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 USP17L10C9JJH3 530 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
PHGDH-224ENST00000641711 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
PHGDH-224ENST00000641711 TSPY3P0CV98 308 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 TSPY8P0CW00 308 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 AKR1B1P15121 316 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 GUCY1A2P33402 732 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 BACE1P56817 501 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 RESTQ13127 1097 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-224ENST00000641711 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-224ENST00000641711 TBC1D10CQ8IV04 446 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 FAM184AQ8NB25 1140 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
PHGDH-224ENST00000641711 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-224ENST00000641711 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 FIBPO43427 364 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 NOVP48745 357 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-224ENST00000641711 KIF23Q02241 960 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-224ENST00000641711 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
PHGDH-224ENST00000641711 SEPT2Q15019 361 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 CCL15Q16663 113 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 CCDC183Q5T5S1 534 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 ATL3Q6DD88 541 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 IQCA1Q86XH1 822 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 LPAR1Q92633 364 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 TMEM87BQ96K49 555 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 FEZ1Q99689 392 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
PHGDH-224ENST00000641711 PARP14Q460N5 1801 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 SYCE3A1L190 88 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 H3BQV1 296 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 SMIM22K7EJ46 135 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-224ENST00000641711 RANBP6O60518 1105 aaKnown RBP11.89□□□□□ -0.51
PHGDH-224ENST00000641711 PRDM1O75626 825 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 TTLL1O95922 423 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 TFAP4Q01664 338 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 SPP2Q13103 211 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
PHGDH-224ENST00000641711 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 CHST3Q7LGC8 479 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-224ENST00000641711 MKL1Q969V6 931 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 PPP1R9BQ96SB3 815 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 AGTPBP1Q9UPW5 1226 aa11.89□□□□□ -0.51
PHGDH-224ENST00000641711 NEDD4P46934 1319 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 KLF18A0A0U1RQI7 1052 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 DTNBO60941 627 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 AOC2O75106 756 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 CCT2P78371 535 aaKnown RBP11.88□□□□□ -0.51
PHGDH-224ENST00000641711 JAG1P78504 1218 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 GRM1Q13255 1194 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 MTMR2Q13614 643 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
PHGDH-224ENST00000641711 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 SGMS1Q86VZ5 419 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 BRI3BPQ8WY22 251 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
PHGDH-224ENST00000641711 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 GOPCQ9HD26 462 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-224ENST00000641711 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
PHGDH-224ENST00000641711 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 GOLGA8BA8MQT2 603 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 HOXA7P31268 230 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 LIFRP42702 1097 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 HMGCS2P54868 508 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 MOGSQ13724 837 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 DGKHQ86XP1 1220 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 TSPY26PQ9H489 355 aa11.87□□□□□ -0.51
PHGDH-224ENST00000641711 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
PHGDH-224ENST00000641711 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms