RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HMGCS2P54868 508 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 KLRC3Q07444 240 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
PHGDH-218ENST00000641491 OTUD7BQ6GQQ9 843 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 APOA5Q6Q788 366 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 TRIM22Q8IYM9 498 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 SPICE1Q8N0Z3 855 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 ACER1Q8TDN7 264 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 MKL1Q969V6 931 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 LZTS2Q9BRK4 669 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.08■□□□□ 0
PHGDH-218ENST00000641491 TSKSQ9UJT2 592 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 DOCK1Q14185 1865 aa15.08■□□□□ 0
PHGDH-218ENST00000641491 POLR2AP24928 1970 aaKnown RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 NDUFB10O96000 172 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 IRX3P78415 501 aaPredicted RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 SREBF2Q12772 1141 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 GMCL1Q96IK5 515 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 HHIPL1Q96JK4 782 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 MAP3K14Q99558 947 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 MYL10Q9BUA6 226 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 PNMA3Q9UL41 463 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 AFG3L2Q9Y4W6 797 aa15.07■□□□□ 0
PHGDH-218ENST00000641491 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.07■□□□□ 0
PHGDH-218ENST00000641491 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
PHGDH-218ENST00000641491 IRF6O14896 467 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 AOC2O75106 756 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 RXRAP19793 462 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 OSBPP22059 807 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 STAT2P52630 851 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 CCT2P78371 535 aaKnown RBP15.06■□□□□ 0
PHGDH-218ENST00000641491 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 FAM160B2Q86V87 743 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 FANCBQ8NB91 859 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 PROCA1Q8NCQ7 364 aaPredicted RBP15.06■□□□□ 0
PHGDH-218ENST00000641491 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 SNX21Q969T3 373 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
PHGDH-218ENST00000641491 GPHNQ9NQX3 736 aaPredicted RBP15.06■□□□□ 0
PHGDH-218ENST00000641491 FRMPD2Q68DX3 1309 aaPredicted RBP15.06■□□□□ 0
PHGDH-218ENST00000641491 CASP8AP2Q9UKL3 1982 aa15.05■□□□□ 0
PHGDH-218ENST00000641491 CCL15-CCL14A0A0B4J2E2 113 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 PDHBP11177 359 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 JAG1P78504 1218 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 DGKZQ13574 1117 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 GRM4Q14833 912 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 CCL15Q16663 113 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 FAM83BQ5T0W9 1011 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 SPRYD7Q5W111 196 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 RASAL3Q86YV0 1011 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 FAM184AQ8NB25 1140 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 RPAP3Q9H6T3 665 aaPredicted RBP15.05■□□□□ -0
PHGDH-218ENST00000641491 GPCPD1Q9NPB8 672 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
PHGDH-218ENST00000641491 FEM1BQ9UK73 627 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 TPCN1Q9ULQ1 816 aa15.05■□□□□ -0
PHGDH-218ENST00000641491 A0A0G2JLL6 359 aaPredicted RBP15.04■□□□□ -0
PHGDH-218ENST00000641491 A0A1W2PRG0 241 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L15C9J2P7 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 TMEM232C9JQI7 657 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L11C9JVI0 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L18D6R9N7 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L22D6RA61 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L19D6RCP7 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L20D6RJB6 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 PFKFB2O60825 505 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 FLOT1O75955 427 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 SLC10A3P09131 477 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 VCAM1P19320 739 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
PHGDH-218ENST00000641491 USP17L24Q0WX57 530 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 TRAF1Q13077 416 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 KCTD1Q719H9 257 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 PRRT2Q7Z6L0 340 aaPredicted RBP15.04■□□□□ -0
PHGDH-218ENST00000641491 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 WASF1Q92558 559 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 BRPF3Q9ULD4 1205 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 KCNH4Q9UQ05 1017 aa15.04■□□□□ -0
PHGDH-218ENST00000641491 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 KLRF2D3W0D1 207 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 GOLGA8HP0CJ92 632 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 XBP1P17861 261 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 NOVP48745 357 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 INHBEP58166 350 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SSRP1Q08945 709 aaKnown RBP15.03■□□□□ -0
PHGDH-218ENST00000641491 ZNF543Q08ER8 600 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 NOGQ13253 232 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SH3D19Q5HYK7 790 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
PHGDH-218ENST00000641491 NKX2-3Q8TAU0 364 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SMCR8Q8TEV9 937 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms