RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 NDUFB10O96000 172 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 SYT1P21579 422 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 FUT2Q10981 343 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 VGLL4Q14135 290 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 MAP3K11Q16584 847 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 PPP1R3FQ6ZSY5 799 aaPredicted RBP23■■□□□ 1.27
PHGDH-210ENST00000641115 ANKRD13AQ8IZ07 590 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 VCPKMTQ9H867 229 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 ZNF408Q9H9D4 720 aa23■■□□□ 1.27
PHGDH-210ENST00000641115 GPBP1L1Q9HC44 474 aaPredicted RBP23■■□□□ 1.27
PHGDH-210ENST00000641115 RBM27Q9P2N5 1060 aaKnown RBP23■■□□□ 1.27
PHGDH-210ENST00000641115 ZYXQ15942 572 aaKnown RBP23■■□□□ 1.27
PHGDH-210ENST00000641115 PRPF3O43395 683 aaKnown RBP22.99■■□□□ 1.27
PHGDH-210ENST00000641115 STX6O43752 255 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 SMARCA1P28370 1054 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 CHADLQ6NUI6 762 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 WDR18Q9BV38 432 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 SPZ1Q9BXG8 430 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 GPCPD1Q9NPB8 672 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 SNCAIPQ9Y6H5 919 aa22.99■■□□□ 1.27
PHGDH-210ENST00000641115 USP17L10C9JJH3 530 aa22.98■■□□□ 1.27
PHGDH-210ENST00000641115 KCTD1Q719H9 257 aa22.98■■□□□ 1.27
PHGDH-210ENST00000641115 ZNF280CQ8ND82 737 aa22.98■■□□□ 1.27
PHGDH-210ENST00000641115 KIAA1683Q9H0B3 1180 aa22.98■■□□□ 1.27
PHGDH-210ENST00000641115 ZHX2Q9Y6X8 837 aa22.98■■□□□ 1.27
PHGDH-210ENST00000641115 WDR33Q9C0J8 1336 aaKnown RBP22.97■■□□□ 1.27
PHGDH-210ENST00000641115 VPS37CA5D8V6 355 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-210ENST00000641115 BMP3P12645 472 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 USP14P54578 494 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 PKP1Q13835 747 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 SPICE1Q8N0Z3 855 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 ALG1Q9BT22 464 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 V9GY48 417 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-210ENST00000641115 TRPM7Q96QT4 1865 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 H3BQV1 296 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 SPP2Q13103 211 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 MTMR2Q13614 643 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 IFFO2Q5TF58 517 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 MOB2Q70IA6 237 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 LPAR1Q92633 364 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 C8orf76Q96K31 380 aa22.97■■□□□ 1.27
PHGDH-210ENST00000641115 UBA5Q9GZZ9 404 aa22.96■■□□□ 1.27
PHGDH-210ENST00000641115 BAZ2BQ9UIF8 2168 aaKnown RBP22.96■■□□□ 1.27
PHGDH-210ENST00000641115 CYTH3O43739 400 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 BRD1O95696 1058 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 FOSBP53539 338 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 FKBP1BP68106 108 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 FMR1Q06787 632 aaKnown RBP eCLIP22.95■■□□□ 1.263e-7■■■□□ 15
PHGDH-210ENST00000641115 TRIM29Q14134 588 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 RRP36Q96EU6 259 aaKnown RBP22.95■■□□□ 1.26
PHGDH-210ENST00000641115 NUP88Q99567 741 aaPredicted RBP22.95■■□□□ 1.26
PHGDH-210ENST00000641115 CPVLQ9H3G5 476 aa22.95■■□□□ 1.26
PHGDH-210ENST00000641115 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.95■■□□□ 1.26
PHGDH-210ENST00000641115 TRIM75PA6NK02 468 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 UBE2Q2LH0YL09 131 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 XBP1P17861 261 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 BACE1P56817 501 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 IKQ13123 557 aaPredicted RBP22.94■■□□□ 1.26
PHGDH-210ENST00000641115 TTBK2Q6IQ55 1244 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 PIBF1Q8WXW3 757 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 AIFM3Q96NN9 605 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 RIOX1Q9H6W3 641 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 ELP3Q9H9T3 547 aa22.94■■□□□ 1.26
PHGDH-210ENST00000641115 SEC63Q9UGP8 760 aaKnown RBP22.94■■□□□ 1.26
PHGDH-210ENST00000641115 hCG_1642624A0A1W2PR95 340 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 UNCXA6NJT0 531 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 C19orf81C9J6K1 198 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 CELF2O95319 508 aaKnown RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 KIAA1755Q5JYT7 1200 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 FAM83BQ5T0W9 1011 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 RGS22Q8NE09 1264 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 GBA2Q9HCG7 927 aaPredicted RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 MTMR6Q9Y217 621 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 PTPRFP10586 1907 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 TMEM232C9JQI7 657 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 WDR46O15213 610 aaKnown RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 ZSCAN22P10073 491 aaPredicted RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 SCG2P13521 617 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 SLC16A2P36021 539 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 STAT2P52630 851 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 PPATQ06203 517 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 PKN1Q16512 942 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 PFKFB3Q16875 520 aaPredicted RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 SLC35G1Q2M3R5 365 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 ERO1BQ86YB8 467 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 C2orf69Q8N8R5 385 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 RBM46Q8TBY0 533 aaKnown RBP22.93■■□□□ 1.26
PHGDH-210ENST00000641115 CLMNQ96JQ2 1002 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 VAT1LQ9HCJ6 419 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 AFG3L2Q9Y4W6 797 aa22.93■■□□□ 1.26
PHGDH-210ENST00000641115 ITGBL1O95965 494 aaPredicted RBP22.92■■□□□ 1.26
PHGDH-210ENST00000641115 LDLRAD1Q5T700 205 aa22.92■■□□□ 1.26
PHGDH-210ENST00000641115 HOMER1Q86YM7 354 aa22.92■■□□□ 1.26
PHGDH-210ENST00000641115 ADGRF4Q8IZF3 695 aa22.92■■□□□ 1.26
PHGDH-210ENST00000641115 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
PHGDH-210ENST00000641115 ZDHHC9Q9Y397 364 aa22.92■■□□□ 1.26
PHGDH-210ENST00000641115 SPDYE5A6NIY4 337 aa22.91■■□□□ 1.26
PHGDH-210ENST00000641115 FOXD4L5Q5VV16 416 aaPredicted RBP22.91■■□□□ 1.26
PHGDH-210ENST00000641115 FOXD4L4Q8WXT5 416 aaPredicted RBP22.91■■□□□ 1.26
PHGDH-210ENST00000641115 OTUD5Q96G74 571 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms