RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 THAP12O43422 761 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 ZSCAN32Q9NX65 697 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 RNF40O75150 1001 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 HADHQ16836 314 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 ZBTB33Q86T24 672 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 MOSPD1Q9UJG1 213 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 LRFN2Q9ULH4 789 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 DPP8Q6V1X1 898 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 NIM1KQ8IY84 436 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 MICAL1Q8TDZ2 1067 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 MAIP1Q8WWC4 291 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 ATP6V0A1Q93050 837 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 PIK3CAP42336 1068 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 MTRQ99707 1265 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 PCDHB13Q9Y5F0 798 aa19.23■□□□□ 0.67
CACNA1A-225ENST00000636389 FAM180AQ6UWF9 173 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 NLRP7Q8WX94 980 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 AMFRQ9UKV5 643 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 PRIM1P49642 420 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 SLC7A5P2Q9GIP4 190 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 KIAA1841Q6NSI8 718 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 ARHGAP25P42331 645 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 TTC1Q99614 292 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 PPP1R9AQ9ULJ8 1098 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 GAS7O60861 476 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 ADCY7P51828 1080 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 ARHGDIAP52565 204 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 CFAP61Q8NHU2 1237 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 CROCCP2Q86T23 111 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 MEIS3Q99687 375 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 ARMT1Q9H993 441 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 DLATP10515 647 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 AK2P54819 239 aa19.22■□□□□ 0.67
CACNA1A-225ENST00000636389 H3BRJ5 948 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 ZBTB17Q13105 803 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 MTMR3Q13615 1198 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 TRIM59Q8IWR1 403 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 SUGCTQ9HAC7 445 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 PAK2Q13177 524 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 RCN2Q14257 317 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 U2AF2P26368 475 aaKnown RBP eCLIP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 EIF2AQ9BY44 585 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 FAM186BQ8IYM0 893 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 LSM14BQ9BX40 385 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 BICC1Q9H694 974 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 EFCAB5A4FU69 1503 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 RSRC2Q7L4I2 434 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 NELFBQ8WX92 580 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 HACD3Q9P035 362 aa19.21■□□□□ 0.67
CACNA1A-225ENST00000636389 KLHL14Q9P2G3 628 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 ZBTB8OSQ8IWT0 167 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 TTF2Q9UNY4 1162 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 BNIP3LO60238 219 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 DHX32Q7L7V1 743 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 GDAP1Q8TB36 358 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 KDRP35968 1356 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 EVI5O60447 810 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 DMP1Q13316 513 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 NONOQ15233 471 aaKnown RBP eCLIP19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 LZICQ8WZA0 190 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 ARPP19P56211 112 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 POLR3CQ9BUI4 534 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 GLT8D2Q9H1C3 349 aa19.2■□□□□ 0.66
CACNA1A-225ENST00000636389 SGK1O00141 431 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 WDR48Q8TAF3 677 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 DEXIO95424 95 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 RRAGAQ7L523 313 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 MMTAG2Q9BU76 263 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 GTPBP10A4D1E9 387 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 GCNAQ96QF7 691 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 TLR3O15455 904 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 GDAP1L1Q96MZ0 367 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 PTPREP23469 700 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 HIBADHP31937 336 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 ASPHQ12797 758 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 H7C0C1 242 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 SRGAP2BP0DMP2 458 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 CTNNA1P35221 906 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 ATP5OP48047 213 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 TRMT10CQ7L0Y3 403 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 U2AF1L4Q8WU68 220 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 CWF19L2Q2TBE0 894 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 TMEM259Q4ZIN3 620 aa19.19■□□□□ 0.66
CACNA1A-225ENST00000636389 PFDN1O60925 122 aa19.18■□□□□ 0.66
CACNA1A-225ENST00000636389 SLC8A2Q9UPR5 921 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms