RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 TTC30AQ86WT1 665 aa17.6■□□□□ 0.41
CACNA1A-221ENST00000636012 VPS37BQ9H9H4 285 aa17.6■□□□□ 0.41
CACNA1A-221ENST00000636012 ABCF3Q9NUQ8 709 aa17.6■□□□□ 0.41
CACNA1A-221ENST00000636012 A2MP01023 1474 aa17.6■□□□□ 0.41
CACNA1A-221ENST00000636012 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 KRBA2Q6ZNG9 492 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 CTAGE3PQ8IX95 158 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 RAB3IPQ96QF0 476 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 LZTS2Q9BRK4 669 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 DTNBO60941 627 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 Q3C1V9 767 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 STAM2O75886 525 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 ABCB4P21439 1286 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 SYCE1Q8N0S2 351 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 REXO1Q8N1G1 1221 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 TECP42680 631 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 KRT25Q7Z3Z0 450 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 TRIM56Q9BRZ2 755 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 BUB1BO60566 1050 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 VAMP4O75379 141 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 SYF2O95926 243 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 PTPROQ16827 1216 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 SMCO2A6NFE2 343 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 STK25O00506 426 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 KIF11P52732 1056 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 B4GALNT4Q76KP1 1039 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 RYBPQ8N488 228 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 PPP4R1Q8TF05 950 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 GON4LQ3T8J9 2241 aa17.59■□□□□ 0.41
CACNA1A-221ENST00000636012 YWHAEP62258 255 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 LSM14BQ9BX40 385 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 FLOT1O75955 427 aa17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 RRAGAQ7L523 313 aa17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 G2E3Q7L622 706 aa17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 SULF1Q8IWU6 871 aa17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
CACNA1A-221ENST00000636012 CUTAO60888 179 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 TUBB4AP04350 444 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 DLATP10515 647 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 RPS6KC1Q96S38 1066 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 TNNC2P02585 160 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 SNX21Q969T3 373 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 RMDN2Q96LZ7 410 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 OTUD7BQ6GQQ9 843 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 ABI1Q8IZP0 508 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 NME8Q8N427 588 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 NLRC4Q9NPP4 1024 aa17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-221ENST00000636012 ATF7P17544 494 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 POLGP54098 1239 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 USH1CQ9Y6N9 552 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 VCXQ9H320 206 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 FAM207AQ9NSI2 230 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 IFNB1P01574 187 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 PPP2R5AQ15172 486 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 CHURC1Q8WUH1 139 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 ZAP70P43403 619 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 FANCCQ00597 558 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 ZBTB8OSQ8IWT0 167 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 DIS3L2Q8IYB7 885 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 POMGNT1Q8WZA1 660 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 USP26Q9BXU7 913 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 SYNDIG1LA6NDD5 238 aa17.57■□□□□ 0.4
CACNA1A-221ENST00000636012 BAG6P46379 1132 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 XKR9Q5GH70 373 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 GBP6Q6ZN66 633 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 CAPN12Q6ZSI9 719 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 GPBP1Q86WP2 473 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 KIAA0825Q8IV33 1275 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 PLCB1Q9NQ66 1216 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 RPS6KA1Q15418 735 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 LONRF2Q1L5Z9 754 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 VSIG1Q86XK7 387 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 DISC1Q9NRI5 854 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 TNFAIP1Q13829 316 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 DPP9Q86TI2 863 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 LLPHQ9BRT6 129 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 PIK3CAP42336 1068 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 CERKLQ49MI3 558 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 SPDL1Q96EA4 605 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 HNRNPCL2B2RXH8 293 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 K7ENM7 598 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 HNRNPCL1O60812 293 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 STK38LQ9Y2H1 464 aa17.56■□□□□ 0.4
CACNA1A-221ENST00000636012 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
CACNA1A-221ENST00000636012 LRRIQ4A6NIV6 560 aa17.55■□□□□ 0.4
CACNA1A-221ENST00000636012 COG7P83436 770 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms