RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 WWC2Q6AWC2 1192 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 RRP36Q96EU6 259 aaKnown RBP11.36□□□□□ -0.59
VTA1-205ENST00000620996 VEZTQ9HBM0 779 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 ANO10Q9NW15 660 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
VTA1-205ENST00000620996 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 GDF11O95390 407 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 C7orf43Q8WVR3 580 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 TRIM5Q9C035 493 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 TMOD2Q9NZR1 351 aa11.36□□□□□ -0.59
VTA1-205ENST00000620996 ADAMTSL1Q8N6G6 1762 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 VWA3AA6NCI4 1184 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 CYTH3O43739 400 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 CALML3P27482 149 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 POLD1P28340 1107 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 PNOCQ13519 176 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 SHROOM1Q2M3G4 852 aaPredicted RBP11.35□□□□□ -0.59
VTA1-205ENST00000620996 CEP57L1Q8IYX8 460 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 RTKN2Q8IZC4 609 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 PIGSQ96S52 555 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 CSRNP2Q9H175 543 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
VTA1-205ENST00000620996 WNT7AO00755 349 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 POLR2DO15514 142 aaKnown RBP11.35□□□□□ -0.59
VTA1-205ENST00000620996 SHMT1P34896 483 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 RESP18Q5W5W9 173 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 RBM43Q6ZSC3 357 aaKnown RBP11.35□□□□□ -0.59
VTA1-205ENST00000620996 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 CCDC148Q8NFR7 591 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 MYH1P12882 1939 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 MYH6P13533 1939 aa11.35□□□□□ -0.59
VTA1-205ENST00000620996 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 TTLL1O95922 423 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 IKQ13123 557 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 AOPEPQ8N6M6 819 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 RASSF8Q8NHQ8 419 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 PSMD14O00487 310 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 SLC16A2P36021 539 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 NT5C2P49902 561 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 LONRF3Q496Y0 759 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 DHX58Q96C10 678 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
VTA1-205ENST00000620996 GABPAQ06546 454 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 PTGDRQ13258 359 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 SLC35G1Q2M3R5 365 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 SERPINA10Q9UK55 444 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 PCDHA4Q9UN74 947 aa11.34□□□□□ -0.59
VTA1-205ENST00000620996 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.59
VTA1-205ENST00000620996 AP5Z1O43299 807 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 INF2Q27J81 1249 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 DPCR1Q3MIW9 517 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 SCAF8Q9UPN6 1271 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 SMCO2A6NFE2 343 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 FOXN1O15353 648 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 PDHBP11177 359 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 PTPREP23469 700 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 STXBP3O00186 592 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 NPY5RQ15761 445 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 JAKMIP3Q5VZ66 844 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 COA7Q96BR5 231 aa11.33□□□□□ -0.6
VTA1-205ENST00000620996 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 HOOK1Q9UJC3 728 aaKnown RBP11.33□□□□□ -0.6
VTA1-205ENST00000620996 AFMP43652 599 aa11.32□□□□□ -0.6
VTA1-205ENST00000620996 TTBK2Q6IQ55 1244 aa11.32□□□□□ -0.6
VTA1-205ENST00000620996 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
VTA1-205ENST00000620996 KRBA2Q6ZNG9 492 aa11.32□□□□□ -0.6
VTA1-205ENST00000620996 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
VTA1-205ENST00000620996 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms