RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 FOCADQ5VW36 1801 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 USP17L3A6NCW0 530 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 USP17L4A6NCW7 530 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 ATP1A3P13637 1013 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 LONP1P36776 959 aaKnown RBP27.09■■□□□ 1.93
HOXA4-204ENST00000610970 RHBDL3P58872 404 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 USP17L1Q7RTZ2 530 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 DEFB132Q7Z7B7 95 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 SLC51AQ86UW1 340 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 IQUBQ8NA54 791 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 CCDC112Q8NEF3 446 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 PAGE5Q96GU1 130 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 EPSTI1Q96J88 318 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 EYA3Q99504 573 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 SPZ1Q9BXG8 430 aa27.09■■□□□ 1.93
HOXA4-204ENST00000610970 C6orf229H3BNL8 230 aa27.08■■□□□ 1.93
HOXA4-204ENST00000610970 PPEF1O14829 653 aaPredicted RBP27.08■■□□□ 1.93
HOXA4-204ENST00000610970 SAP30BPQ9UHR5 308 aaKnown RBP27.08■■□□□ 1.93
HOXA4-204ENST00000610970 ATP6V0A2Q9Y487 856 aa27.08■■□□□ 1.93
HOXA4-204ENST00000610970 TUBB4AP04350 444 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 NOVP48745 357 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 HSP90AA2PQ14568 343 aaPredicted RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 CFAP100Q494V2 611 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 VSTM4Q8IW00 320 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 STAG2Q8N3U4 1231 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 CCDC12Q8WUD4 166 aaPredicted RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 MYH1P12882 1939 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 TNS1Q9HBL0 1735 aaKnown RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 SNED1Q8TER0 1413 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 PSDA5PKW4 1024 aaPredicted RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 M0R2N6 131 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 ZNF18P17022 549 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 SLC4A8Q2Y0W8 1093 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 ARMCX5Q6P1M9 558 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 CCAR2Q8N163 923 aaKnown RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 NLGN1Q8N2Q7 840 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 C16orf45Q96MC5 204 aaPredicted RBP27.07■■□□□ 1.92
HOXA4-204ENST00000610970 BARHL2Q9NY43 387 aa27.07■■□□□ 1.92
HOXA4-204ENST00000610970 A0A087X0B3 334 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 VWA3AA6NCI4 1184 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 WNT7AO00755 349 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 TOP1P11387 765 aaKnown RBP27.06■■□□□ 1.92
HOXA4-204ENST00000610970 SF3B2Q13435 895 aaKnown RBP27.06■■□□□ 1.92
HOXA4-204ENST00000610970 TXNRD1Q16881 649 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 STX8Q9UNK0 236 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 NRXN2Q9P2S2 1712 aa27.06■■□□□ 1.92
HOXA4-204ENST00000610970 CCDC194A0A1B0GVG4 234 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 LAD1O00515 517 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 CCP110O43303 1012 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 APBA3O96018 575 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 DPYDQ12882 1025 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 NOM1Q5C9Z4 860 aaKnown RBP27.05■■□□□ 1.92
HOXA4-204ENST00000610970 NYAP1Q6ZVC0 841 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 PROM2Q8N271 834 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 SLC44A5Q8NCS7 719 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 PDCL3Q9H2J4 239 aa27.05■■□□□ 1.92
HOXA4-204ENST00000610970 PLIN4Q96Q06 1357 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 PLSCR1O15162 318 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 TXLNAP40222 546 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 PTPN14Q15678 1187 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 GRAMD1CQ8IYS0 662 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 C4orf32Q8N8J7 132 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 NFE2L3Q9Y4A8 694 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 QSER1Q2KHR3 1735 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 RIOK3O14730 519 aaKnown RBP27.04■■□□□ 1.92
HOXA4-204ENST00000610970 PARP1P09874 1014 aaKnown RBP27.04■■□□□ 1.92
HOXA4-204ENST00000610970 MCM7P33993 719 aa27.04■■□□□ 1.92
HOXA4-204ENST00000610970 STXBP3O00186 592 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 VEGFAP15692 232 aaPredicted RBP27.03■■□□□ 1.92
HOXA4-204ENST00000610970 NPR1P16066 1061 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 ALDH1B1P30837 517 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 E2F4Q16254 413 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 CEP135Q66GS9 1140 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 WWC2Q6AWC2 1192 aa27.03■■□□□ 1.92
HOXA4-204ENST00000610970 KLRF2D3W0D1 207 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 CDK11BP21127 795 aaKnown RBP27.02■■□□□ 1.92
HOXA4-204ENST00000610970 SEMA3FQ13275 785 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 SPATA1Q5VX52 437 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 FLAD1Q8NFF5 587 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 DPF2Q92785 391 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 GPKOWQ92917 476 aaPredicted RBP eCLIP27.02■■□□□ 1.92
HOXA4-204ENST00000610970 PCDHA6Q9UN73 950 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 DAGLAQ9Y4D2 1042 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 PCDHA8Q9Y5H6 950 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 ANKRD31Q8N7Z5 1873 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 hCG_1984214I3L0E3 225 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 CYTH3O43739 400 aa27.02■■□□□ 1.92
HOXA4-204ENST00000610970 FMR1Q06787 632 aaKnown RBP eCLIP27.02■■□□□ 1.92
HOXA4-204ENST00000610970 ZNF713Q8N859 430 aaPredicted RBP27.02■■□□□ 1.92
HOXA4-204ENST00000610970 CTIFO43310 598 aaKnown RBP27.01■■□□□ 1.91
HOXA4-204ENST00000610970 GTPBP6O43824 516 aaPredicted RBP27.01■■□□□ 1.91
HOXA4-204ENST00000610970 PRPHP41219 470 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 AFMP43652 599 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 GTF2IP78347 998 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 SYCP1Q15431 976 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 ZC3H12CQ9C0D7 883 aaKnown RBP27.01■■□□□ 1.91
HOXA4-204ENST00000610970 ZMYND12Q9H0C1 365 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 MYO3BQ8WXR4 1341 aa27.01■■□□□ 1.91
HOXA4-204ENST00000610970 KRT25Q7Z3Z0 450 aa27■■□□□ 1.91
HOXA4-204ENST00000610970 HEATR3Q7Z4Q2 680 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms