RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DCAF15Q66K64 600 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 DYMQ7RTS9 669 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 ADAT2Q7Z6V5 191 aaKnown RBP7.04□□□□□ -1.28
LINC00397-202ENST00000606785 ZNF512BQ96KM6 892 aaPredicted RBP7.04□□□□□ -1.28
LINC00397-202ENST00000606785 FGD4Q96M96 766 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 FAM126AQ9BYI3 521 aaPredicted RBP7.04□□□□□ -1.28
LINC00397-202ENST00000606785 FOXQ1Q9C009 403 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 INTS7Q9NVH2 962 aaKnown RBP7.04□□□□□ -1.28
LINC00397-202ENST00000606785 CHPF2Q9P2E5 772 aa7.04□□□□□ -1.28
LINC00397-202ENST00000606785 DNAJC25-GNG10A0A024R161 153 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 DYRK3O43781 588 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 RNGTTO60942 597 aaKnown RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 PPM1BO75688 479 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 LRIG2O94898 1065 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 TIAF1O95411 115 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 CAPNS1P04632 268 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 CDKN1CP49918 316 aaPredicted RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 CT47A1Q5JQC4 288 aaPredicted RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 RNF180Q86T96 592 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 MFSD2AQ8NA29 543 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 BVESQ8NE79 360 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 PPP1R13LQ8WUF5 828 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 CEP89Q96ST8 783 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 IER2Q9BTL4 223 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 CHMP4AQ9BY43 222 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 MKRN2Q9H000 416 aaKnown RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 WHRNQ9P202 907 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 G3BP2Q9UN86 482 aaKnown RBP7.03□□□□□ -1.28
LINC00397-202ENST00000606785 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 ZNF451Q9Y4E5 1061 aa7.03□□□□□ -1.28
LINC00397-202ENST00000606785 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 PRODHO43272 600 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 PABPC1P11940 636 aaKnown RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 DRD2P14416 443 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 CD247P20963 164 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 ASPAP45381 313 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 RNF4P78317 190 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 NFKB2Q00653 900 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 NSMFQ6X4W1 530 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 ARMCX6Q7L4S7 300 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 SMYD4Q8IYR2 804 aaPredicted RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 C7orf61Q8IZ16 206 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 C12orf50Q8NA57 414 aaPredicted RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 LGR4Q9BXB1 951 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 SSU72Q9NP77 194 aaKnown RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 TPSG1Q9NRR2 321 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 FAM105AQ9NUU6 356 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 MAGEC2Q9UBF1 373 aaPredicted RBP7.02□□□□□ -1.29
LINC00397-202ENST00000606785 MCM8Q9UJA3 840 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 SUGT1Q9Y2Z0 365 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
LINC00397-202ENST00000606785 SHOXO15266 292 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 GRIA2P42262 883 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 EVA1CP58658 441 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 EXOSC10Q01780 885 aaKnown RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 MAP7Q14244 749 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 TRIM61Q5EBN2 209 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 FDX2Q6P4F2 183 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 IGF2-ASQ6U949 168 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 LRRTM3Q86VH5 581 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 DDX42Q86XP3 938 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 C2CD4AQ8NCU7 369 aaPredicted RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 OSBP2Q969R2 916 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 VWCEQ96DN2 955 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 RCC1LQ96I51 464 aaKnown RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 MRGPRX3Q96LB0 322 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 TARS2Q9BW92 718 aaKnown RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 PLVAPQ9BX97 442 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
LINC00397-202ENST00000606785 PCOLCE2Q9UKZ9 415 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
LINC00397-202ENST00000606785 COL17A1Q9UMD9 1497 aaPredicted RBP7□□□□□ -1.29
LINC00397-202ENST00000606785 ALG1L2C9J202 215 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 TBX1O43435 398 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 ITGA4P13612 1032 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 SDSP20132 328 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 PMLP29590 882 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 AUHQ13825 339 aaKnown RBP7□□□□□ -1.29
LINC00397-202ENST00000606785 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 ANKRD34AQ69YU3 496 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 POMZP3Q6PJE2 187 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 CRACR2BQ8N4Y2 399 aaPredicted RBP7□□□□□ -1.29
LINC00397-202ENST00000606785 UBR7Q8N806 425 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 DNAJB8Q8NHS0 232 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 JDP2Q8WYK2 163 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 GP6Q9HCN6 339 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 SFMBT1Q9UHJ3 866 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 AKT3Q9Y243 479 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 EMC9Q9Y3B6 208 aa7□□□□□ -1.29
LINC00397-202ENST00000606785 A0A087WZG4 1122 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms