RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GJC2Q5T442 439 aaPredicted RBP21.6■■□□□ 1.05
CHMP2A-208ENST00000601220 GIMAP6Q6P9H5 292 aa21.6■■□□□ 1.05
CHMP2A-208ENST00000601220 MAML3Q96JK9 1138 aa21.6■■□□□ 1.05
CHMP2A-208ENST00000601220 VWA5AO00534 786 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 SLC25A27O95847 323 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 TSHZ3Q63HK5 1081 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 RIOX2Q8IUF8 465 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 PPP1R9AQ9ULJ8 1098 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 FRMPD3Q5JV73 1810 aa21.59■■□□□ 1.05
CHMP2A-208ENST00000601220 RNF113AO15541 343 aaKnown RBP21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 FCER1AP12319 257 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 ATN1P54259 1190 aaPredicted RBP21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 MDM2Q00987 491 aaPredicted RBP21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 FAM83BQ5T0W9 1011 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 ANO1Q5XXA6 986 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 ARRDC4Q8NCT1 418 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 APPBP2Q92624 585 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 EPB41L4AQ9HCS5 686 aaPredicted RBP21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 SLC5A4Q9NY91 659 aa21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 ZNF214Q9UL59 606 aaPredicted RBP21.58■■□□□ 1.05
CHMP2A-208ENST00000601220 ROBO3Q96MS0 1386 aa21.58■■□□□ 1.04
CHMP2A-208ENST00000601220 IGKV6D-41A0A0C4DH26 115 aa21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 STAT3P40763 770 aa21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 ZNF792Q3KQV3 632 aa21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 SAMD1Q6SPF0 538 aaPredicted RBP21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 GOPCQ9HD26 462 aa21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 NYAP2Q9P242 653 aa21.57■■□□□ 1.04
CHMP2A-208ENST00000601220 PGK2P07205 417 aa21.56■■□□□ 1.04
CHMP2A-208ENST00000601220 RTP1P59025 263 aa21.56■■□□□ 1.04
CHMP2A-208ENST00000601220 SLC39A5Q6ZMH5 540 aa21.56■■□□□ 1.04
CHMP2A-208ENST00000601220 PARP14Q460N5 1801 aa21.56■■□□□ 1.04
CHMP2A-208ENST00000601220 M0R2C6 588 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 SNX17Q15036 470 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 LRRC41Q15345 812 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 Q7L0L9 218 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 MMP19Q99542 508 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 NUP88Q99567 741 aaPredicted RBP21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 NRBP1Q9UHY1 535 aa21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 DIS3Q9Y2L1 958 aaKnown RBP21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
CHMP2A-208ENST00000601220 MINDY4BA8MYZ0 360 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 GPAA1O43292 621 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 ZFYP08048 801 aaPredicted RBP21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 STK11IPQ8N1F8 1099 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 DEFB123Q8N688 67 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 PCDHB15Q9Y5E8 787 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 MYH7P12883 1935 aa21.54■■□□□ 1.04
CHMP2A-208ENST00000601220 F5H6K3 240 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 NDUFB10O96000 172 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 KLRC3Q07444 240 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 FAM47AQ5JRC9 791 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 MKL1Q969V6 931 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 SLF1Q9BQI6 1058 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 TINF2Q9BSI4 451 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 MKNK2Q9HBH9 465 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 DNAH12Q6ZR08 3092 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 MYH8P13535 1937 aa21.53■■□□□ 1.04
CHMP2A-208ENST00000601220 PATL2C9JE40 543 aaKnown RBP21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 KBTBD13C9JR72 458 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 ZNF865P0CJ78 1059 aaPredicted RBP21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 KCTD2Q14681 263 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 PI4K2BQ8TCG2 481 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 GPATCH3Q96I76 525 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 MTMR10Q9NXD2 777 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 RIPK3Q9Y572 518 aa21.52■■□□□ 1.04
CHMP2A-208ENST00000601220 COL6A3P12111 3177 aa21.52■■□□□ 1.03
CHMP2A-208ENST00000601220 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 RAD21O60216 631 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 GNAT2P19087 354 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 COPB2P35606 906 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 ADCYAP1R1P41586 468 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 IFNL3Q8IZI9 196 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 OTUD7AQ8TE49 926 aaPredicted RBP21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 SEC62Q99442 399 aaKnown RBP21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 CLIP2Q9UDT6 1046 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 PHF24Q9UPV7 400 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 ATP11BQ9Y2G3 1177 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 TTC41PQ6P2S7 1318 aa21.51■■□□□ 1.03
CHMP2A-208ENST00000601220 PRDM1O75626 825 aa21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 TRIM60Q495X7 471 aa21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 PRPF38AQ8NAV1 312 aaKnown RBP21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 CEP95Q96GE4 821 aa21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 LBHD1Q9BQE6 289 aaPredicted RBP21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 TEX13BQ9BXU2 312 aa21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 MTMR4Q9NYA4 1195 aa21.5■■□□□ 1.03
CHMP2A-208ENST00000601220 DNAJC25-GNG10A0A024R161 153 aa21.49■■□□□ 1.03
CHMP2A-208ENST00000601220 POTEB2H3BUK9 544 aa21.49■■□□□ 1.03
CHMP2A-208ENST00000601220 FERMT2Q96AC1 680 aa21.49■■□□□ 1.03
CHMP2A-208ENST00000601220 XPNPEP3Q9NQH7 507 aa21.49■■□□□ 1.03
CHMP2A-208ENST00000601220 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 SNAI1O95863 264 aaPredicted RBP21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 MYCNP04198 464 aaPredicted RBP21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 RARBP10826 455 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 TDO2P48775 406 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 SNRNP48Q6IEG0 339 aaKnown RBP21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 SH3RF1Q7Z6J0 888 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms