RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ANXA1P04083 346 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 ST5P78524 1137 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 PROSER3Q2NL68 480 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 CCDC184Q52MB2 194 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 STYK1Q6J9G0 422 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 XKR5Q6UX68 686 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 MDFIQ99750 246 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 FNDC3AQ9Y2H6 1198 aaKnown RBP9.75□□□□□ -0.85
VMP1-213ENST00000591877 AK5Q9Y6K8 562 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 UBN2Q6ZU65 1347 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 CPNE3O75131 537 aaKnown RBP9.74□□□□□ -0.85
VMP1-213ENST00000591877 EIF2S2P20042 333 aaKnown RBP9.74□□□□□ -0.85
VMP1-213ENST00000591877 LMNB1P20700 586 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 ZNF76P36508 570 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 RAD51AP2Q09MP3 1159 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 PRPF40BQ6NWY9 871 aaKnown RBP9.74□□□□□ -0.85
VMP1-213ENST00000591877 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 MASTLQ96GX5 879 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 TGIF2Q9GZN2 237 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 ABCC12Q96J65 1359 aa9.74□□□□□ -0.85
VMP1-213ENST00000591877 CEP350Q5VT06 3117 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 NPHP1O15259 732 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 ARSDP51689 593 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 ORC1Q13415 861 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 SUSD4Q5VX71 490 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 PDE12Q6L8Q7 609 aaKnown RBP9.73□□□□□ -0.85
VMP1-213ENST00000591877 NT5DC4Q86YG4 428 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 ZNF34Q8IZ26 560 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 UBXN4Q92575 508 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 LAMB2P55268 1798 aa9.73□□□□□ -0.85
VMP1-213ENST00000591877 APAF1O14727 1248 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 OPLAHO14841 1288 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 EFSO43281 561 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 TOMM70O94826 608 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 ALBP02768 609 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 NPR1P16066 1061 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 GPTP24298 496 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 IDH3AP50213 366 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 OLFM4Q6UX06 510 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 KIF6Q6ZMV9 814 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
VMP1-213ENST00000591877 LTBP3Q9NS15 1303 aa9.72□□□□□ -0.85
VMP1-213ENST00000591877 WDR90Q96KV7 1748 aa9.71□□□□□ -0.85
VMP1-213ENST00000591877 NTSR2O95665 410 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 ZNF853P0CG23 659 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 HSPA6P17066 643 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 INPP5BP32019 993 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 ZEB1P37275 1124 aaPredicted RBP9.71□□□□□ -0.86
VMP1-213ENST00000591877 CRY2Q49AN0 593 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 COPS6Q7L5N1 327 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 C11orf16Q9NQ32 467 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 IBTKQ9P2D0 1353 aaPredicted RBP9.71□□□□□ -0.86
VMP1-213ENST00000591877 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 SNED1Q8TER0 1413 aa9.71□□□□□ -0.86
VMP1-213ENST00000591877 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 TNFRSF21O75509 655 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 H2AFB2P0C5Z0 115 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 EIF4BP23588 611 aaKnown RBP9.7□□□□□ -0.86
VMP1-213ENST00000591877 LAMC2Q13753 1193 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 SAMD5Q5TGI4 173 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 SLC51AQ86UW1 340 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 SLC43A3Q8NBI5 491 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 XAGE3Q8WTP9 111 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 NYXQ9GZU5 481 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 TAOK3Q9H2K8 898 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
VMP1-213ENST00000591877 TAF1P21675 1872 aa9.7□□□□□ -0.86
VMP1-213ENST00000591877 ADARB2-AS1A8MUL3 147 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 SIN3BO75182 1162 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 NID1P14543 1247 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 EPB42P16452 691 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 AIMP1Q12904 312 aaKnown RBP9.69□□□□□ -0.86
VMP1-213ENST00000591877 BTLAQ7Z6A9 289 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 DDX60Q8IY21 1712 aaKnown RBP9.69□□□□□ -0.86
VMP1-213ENST00000591877 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 SRCIN1Q9C0H9 1055 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
VMP1-213ENST00000591877 C9orf172C9J069 976 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 HOXB7P09629 217 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 ALDH1B1P30837 517 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
VMP1-213ENST00000591877 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 MBTPS1Q14703 1052 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 PARP10Q53GL7 1025 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 SLC10A5Q5PT55 438 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 SYNE4Q8N205 404 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
VMP1-213ENST00000591877 TINF2Q9BSI4 451 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms