RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
CACTIN-206ENST00000588749 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
CACTIN-206ENST00000588749 UNC93B1Q9H1C4 597 aa17.18■□□□□ 0.34
CACTIN-206ENST00000588749 COL11A1P12107 1806 aaPredicted RBP17.18■□□□□ 0.34
CACTIN-206ENST00000588749 TNRC18O15417 2968 aaPredicted RBP17.17■□□□□ 0.34
CACTIN-206ENST00000588749 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 ORC4O43929 436 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 HMGCRP04035 888 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 PLS1Q14651 629 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 RRP12Q5JTH9 1297 aaKnown RBP17.17■□□□□ 0.34
CACTIN-206ENST00000588749 MKL1Q969V6 931 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 MOV10L1Q9BXT6 1211 aaKnown RBP17.17■□□□□ 0.34
CACTIN-206ENST00000588749 SPATC1LQ9H0A9 340 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
CACTIN-206ENST00000588749 NMT2O60551 498 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 RGS2P41220 211 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 MORN1Q5T089 497 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 GMCL1P1Q8NEA9 526 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 TRIB2Q92519 343 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 USP6NLQ92738 828 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 SYNPO2Q9UMS6 1093 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 STX8Q9UNK0 236 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 IVNS1ABPQ9Y6Y0 642 aa17.16■□□□□ 0.34
CACTIN-206ENST00000588749 GJB1P08034 283 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 FGRP09769 529 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 XRCC5P13010 732 aaKnown RBP17.15■□□□□ 0.34
CACTIN-206ENST00000588749 ERCC3P19447 782 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 PTPREP23469 700 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 TMEM132BQ14DG7 1078 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 SLFN13Q68D06 897 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 APBA2Q99767 749 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 IL25Q9H293 177 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 IL17RBQ9NRM6 502 aa17.15■□□□□ 0.34
CACTIN-206ENST00000588749 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
CACTIN-206ENST00000588749 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 VWA5AO00534 786 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
CACTIN-206ENST00000588749 TRIM32Q13049 653 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 GRB14Q14449 540 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 NCAPG2Q86XI2 1143 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.33
CACTIN-206ENST00000588749 ZNF236Q9UL36 1845 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 ZNF213O14771 459 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 GJA8P48165 433 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 CCL14Q16627 93 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
CACTIN-206ENST00000588749 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 U2AF1L4Q8WU68 220 aaKnown RBP17.13■□□□□ 0.33
CACTIN-206ENST00000588749 STAG1Q8WVM7 1258 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACTIN-206ENST00000588749 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
CACTIN-206ENST00000588749 MROH8Q9H579 483 aa17.13■□□□□ 0.33
CACTIN-206ENST00000588749 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 BMP3P12645 472 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 PRKAR2AP13861 404 aaKnown RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 CHMLP26374 656 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 DEFB118Q96PH6 123 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 PAK6Q9NQU5 681 aaPredicted RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
CACTIN-206ENST00000588749 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 NEDD4P46934 1319 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 RAD50Q92878 1312 aa17.12■□□□□ 0.33
CACTIN-206ENST00000588749 SLC25A27O95847 323 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 MCCP23508 829 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 ADORA2AP29274 412 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 STAT3P40763 770 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 SLC1A4P43007 532 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
CACTIN-206ENST00000588749 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
CACTIN-206ENST00000588749 MKI67P46013 3256 aaKnown RBP17.1■□□□□ 0.33
CACTIN-206ENST00000588749 STRNO43815 780 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 SGPL1O95470 568 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 HOXC6P09630 235 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 NOVP48745 357 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
CACTIN-206ENST00000588749 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 RASGRP2Q7LDG7 609 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 DPP9Q86TI2 863 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 NPLOC4Q8TAT6 608 aa17.1■□□□□ 0.33
CACTIN-206ENST00000588749 ESR2Q92731 530 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms