RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DDAH1O94760 285 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 CALM1P0DP23 149 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 CALM2P0DP24 149 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 CALM3P0DP25 149 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 GJA5P36382 358 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 MCM2P49736 904 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 NEK4P51957 841 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 TROAPQ12815 778 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 FASTKD5Q7L8L6 764 aaKnown RBP12.18□□□□□ -0.46
CCDC47-203ENST00000580986 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 FEZ1Q99689 392 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
CCDC47-203ENST00000580986 SLC45A1Q9Y2W3 748 aa12.18□□□□□ -0.46
CCDC47-203ENST00000580986 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 F5H6K3 240 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
CCDC47-203ENST00000580986 PLA2G6O60733 806 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 CETPP11597 493 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 KLRC3Q07444 240 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 MTMR2Q13614 643 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
CCDC47-203ENST00000580986 GPATCH4Q5T3I0 446 aaKnown RBP12.17□□□□□ -0.46
CCDC47-203ENST00000580986 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 Q6ZUG5 572 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 CATIPQ7Z7H3 387 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
CCDC47-203ENST00000580986 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
CCDC47-203ENST00000580986 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 TRIM75PA6NK02 468 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 SNPHO15079 494 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 PDHBP11177 359 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 CPA1P15085 419 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
CCDC47-203ENST00000580986 MAP2K2P36507 400 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 FGD1P98174 961 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 MOGSQ13724 837 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
CCDC47-203ENST00000580986 ZNF654Q8IZM8 581 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 LRRC47Q8N1G4 583 aaKnown RBP12.16□□□□□ -0.46
CCDC47-203ENST00000580986 BRF1Q92994 677 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 AGTPBP1Q9UPW5 1226 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
CCDC47-203ENST00000580986 NDUFB10O96000 172 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 VCAM1P19320 739 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 KIF5BP33176 963 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 TM4SF4P48230 202 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 AK2P54819 239 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 HMGCS2P54868 508 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC47-203ENST00000580986 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 ANKRD23Q86SG2 305 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 TCEANC2Q96MN5 208 aa12.15□□□□□ -0.46
CCDC47-203ENST00000580986 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 RLFQ13129 1914 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 ZBTB43O43298 467 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 FDX1P10109 184 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 BMP3P12645 472 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 SLC1A4P43007 532 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 GNAQP50148 359 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 MKRN3Q13064 507 aaKnown RBP12.14□□□□□ -0.47
CCDC47-203ENST00000580986 GRM4Q14833 912 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 CYP4F22Q6NT55 531 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 SNX21Q969T3 373 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
CCDC47-203ENST00000580986 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
CCDC47-203ENST00000580986 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
CCDC47-203ENST00000580986 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
CCDC47-203ENST00000580986 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms