RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 VTI1AQ96AJ9 217 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 MMP19Q99542 508 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 YBX2Q9Y2T7 364 aaKnown RBP7.21□□□□□ -1.26
SMG6-219ENST00000575663 PCDHA11Q9Y5I1 949 aa7.21□□□□□ -1.26
SMG6-219ENST00000575663 ZBBXA8MT70 800 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 SMIM22K7EJ46 135 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 FLOT1O75955 427 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 CST5P28325 142 aaPredicted RBP7.2□□□□□ -1.26
SMG6-219ENST00000575663 COPB2P35606 906 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 MCAMP43121 646 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 USP5P45974 858 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 TFCP2Q12800 502 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 KCNA10Q16322 511 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 CSPP1Q1MSJ5 1256 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 C16orf59Q7L2K0 433 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 OTOP2Q7RTS6 562 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 TTC6Q86TZ1 520 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 ACER1Q8TDN7 264 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 HLA-CQ95604 372 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 LENG1Q96BZ8 264 aaPredicted RBP7.2□□□□□ -1.26
SMG6-219ENST00000575663 KCNH6Q9H252 994 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 C11orf16Q9NQ32 467 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 ZHX1Q9UKY1 873 aaPredicted RBP7.2□□□□□ -1.26
SMG6-219ENST00000575663 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 DIS3Q9Y2L1 958 aaKnown RBP7.2□□□□□ -1.26
SMG6-219ENST00000575663 SLC4A7Q9Y6M7 1214 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 SIPA1L1O43166 1804 aa7.2□□□□□ -1.26
SMG6-219ENST00000575663 PI4K2BG5E9Z4 385 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 ARVCFO00192 962 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 MPHOSPH10O00566 681 aaKnown RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 PGK2P07205 417 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 C6orf222P0C671 652 aaPredicted RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 ZNF865P0CJ78 1059 aaPredicted RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 ATP2A2P16615 1042 aaKnown RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 DSG3P32926 999 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 TTC39AQ5SRH9 613 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 FAM126BQ8IXS8 530 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 KLHDC9Q8NEP7 349 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 UIMC1Q96RL1 719 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 HIPK3Q9H422 1215 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 SH2D4AQ9H788 454 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 RTN4Q9NQC3 1192 aaKnown RBP7.19□□□□□ -1.26
SMG6-219ENST00000575663 MTCH2Q9Y6C9 303 aa7.19□□□□□ -1.26
SMG6-219ENST00000575663 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 TLL1O43897 1013 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 DUSP11O75319 330 aaKnown RBP7.18□□□□□ -1.26
SMG6-219ENST00000575663 ASGR1P07306 291 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 CA3P07451 260 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 PFKMP08237 780 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 TAL1P17542 331 aaPredicted RBP7.18□□□□□ -1.26
SMG6-219ENST00000575663 POU3F3P20264 500 aaPredicted RBP7.18□□□□□ -1.26
SMG6-219ENST00000575663 CYP2C18P33260 490 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 CDK7P50613 346 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 RABGGTBP53611 331 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 NHLH1Q02575 133 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 SEPT2Q15019 361 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 TMEM67Q5HYA8 995 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 SAMD1Q6SPF0 538 aaPredicted RBP7.18□□□□□ -1.26
SMG6-219ENST00000575663 ADGRA1Q86SQ6 560 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 RPUSD2Q8IZ73 545 aaKnown RBP7.18□□□□□ -1.26
SMG6-219ENST00000575663 ATG4CQ96DT6 458 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 CDCA7LQ96GN5 454 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 ARHGEF10LQ9HCE6 1279 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 A0A0G2JMZ2 1700 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 LRRC37A2A6NM11 1700 aa7.18□□□□□ -1.26
SMG6-219ENST00000575663 MYADML2A6NDP7 307 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 WDR46O15213 610 aaKnown RBP7.17□□□□□ -1.26
SMG6-219ENST00000575663 ALADP13716 330 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 CYP7A1P22680 504 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
SMG6-219ENST00000575663 SHMT1P34896 483 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 ZNF792Q3KQV3 632 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 CCSAPQ6IQ19 270 aaPredicted RBP7.17□□□□□ -1.26
SMG6-219ENST00000575663 TMEM179Q6ZVK1 233 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 RIOX2Q8IUF8 465 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 KHSRPQ92945 711 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMG6-219ENST00000575663 SEZ6LQ9BYH1 1024 aa7.17□□□□□ -1.26
SMG6-219ENST00000575663 A0A1W2PRG0 241 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 CABYRO75952 493 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 CD4P01730 458 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 POLR3DP05423 398 aaPredicted RBP7.16□□□□□ -1.26
SMG6-219ENST00000575663 ACTN1P12814 892 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 MYOGP15173 224 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 GUCY1A2P33402 732 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 CCL23P55773 120 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 GJA9P57773 515 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 DYNLL1P63167 89 aaKnown RBP7.16□□□□□ -1.26
SMG6-219ENST00000575663 ICA1Q05084 483 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 ALDH1L2Q3SY69 923 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
SMG6-219ENST00000575663 SPICE1Q8N0Z3 855 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 GJD3Q8N144 294 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 MIGA1Q8NAN2 632 aa7.16□□□□□ -1.26
SMG6-219ENST00000575663 ARNTL2Q8WYA1 636 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms