RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TCP11X2Q5H9J9 407 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 TNFRSF25Q93038 417 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 TFR2Q9UP52 801 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 FAN1Q9Y2M0 1017 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 ERVV-1B6SEH8 477 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 FECHP22830 423 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 CHRNDQ07001 517 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 RWDD2AQ9UIY3 292 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 NUP98P52948 1817 aa19.71■□□□□ 0.74
SCARF1-205ENST00000571272 A0A0G2JS52 829 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 LRRC10BA6NIK2 292 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 ENC1O14682 589 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 NMT2O60551 498 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 GYG1P46976 350 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 IQCA1Q86XH1 822 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 CCDC102AQ96A19 550 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 MYO6Q9UM54 1294 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 DOCK2Q92608 1830 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 VGLL3A8MV65 326 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 NLRP5P59047 1200 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 PIP4K2BP78356 416 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 TUBB2AQ13885 445 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 CASP8Q14790 479 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
SCARF1-205ENST00000571272 ANKRD20A12PQ8NF67 263 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 TUBB2BQ9BVA1 445 aa19.7■□□□□ 0.74
SCARF1-205ENST00000571272 TRIM49BA6NDI0 452 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 WHAMMP3Q1A5X7 153 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 HDAC6Q9UBN7 1215 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 LCMT1Q9UIC8 334 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 SLIT2O94813 1529 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 EIF3JO75822 258 aaKnown RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 TMTC3Q6ZXV5 915 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 FEZ2Q9UHY8 353 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 ANAPC4Q9UJX5 808 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 EPN1Q9Y6I3 576 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 GTPBP6O43824 516 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 IL6STP40189 918 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 PRCPP42785 496 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 RIOK1Q9BRS2 568 aaKnown RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 RBM28Q9NW13 759 aaKnown RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 PSD3Q9NYI0 1048 aa19.69■□□□□ 0.74
SCARF1-205ENST00000571272 REXO2Q9Y3B8 237 aaKnown RBP19.69■□□□□ 0.74
SCARF1-205ENST00000571272 SPAG1Q07617 926 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 GOLGA5Q8TBA6 731 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 TTC26A0AVF1 554 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 NDUFA10O95299 355 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 RPN1P04843 607 aaKnown RBP19.68■□□□□ 0.74
SCARF1-205ENST00000571272 ACTN2P35609 894 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 CCDC152Q4G0S7 254 aa19.68■□□□□ 0.74
SCARF1-205ENST00000571272 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 CNTNAP5Q8WYK1 1306 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 AMPD2Q01433 879 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 FAM47AQ5JRC9 791 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 ZNF658Q5TYW1 1059 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-205ENST00000571272 EEF2KMTQ96G04 330 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 LRRIQ3A6PVS8 624 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-205ENST00000571272 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 USP17L21D6R901 530 aa19.67■□□□□ 0.74
SCARF1-205ENST00000571272 CTCFLQ8NI51 663 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-205ENST00000571272 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.67■□□□□ 0.74
SCARF1-205ENST00000571272 MYO1AQ9UBC5 1043 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 BAZ2AQ9UIF9 1905 aaKnown RBP19.66■□□□□ 0.74
SCARF1-205ENST00000571272 ANKRD36CQ5JPF3 1778 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 TRIM66O15016 1216 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 SRGAP2O75044 1071 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
SCARF1-205ENST00000571272 HSP90B2PQ58FF3 399 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 IRF2BP1Q8IU81 584 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 PLIN2Q99541 437 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 CWC15Q9P013 229 aaKnown RBP19.66■□□□□ 0.74
SCARF1-205ENST00000571272 PMS1P54277 932 aaKnown RBP19.66■□□□□ 0.74
SCARF1-205ENST00000571272 TUBB4BP68371 445 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 LEKR1Q6ZMV7 388 aa19.66■□□□□ 0.74
SCARF1-205ENST00000571272 LRP5O75197 1615 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 SCG2P13521 617 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 STAT6P42226 847 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 TRIM14Q14142 442 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 SLC4A8Q2Y0W8 1093 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 CTR9Q6PD62 1173 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 C10orf67Q8IYJ2 551 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 RASSF8Q8NHQ8 419 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 GBP3Q9H0R5 595 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 BTG4Q9NY30 223 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 BCL9LQ86UU0 1499 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 BCL9O00512 1426 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 CALM1P0DP23 149 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 CALM2P0DP24 149 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 CALM3P0DP25 149 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 OR8K1Q8NGG5 319 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 RASGRP4Q8TDF6 673 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 CAPZA3Q96KX2 299 aa19.65■□□□□ 0.74
SCARF1-205ENST00000571272 LUC7L2Q9Y383 392 aaKnown RBP19.65■□□□□ 0.74
SCARF1-205ENST00000571272 TRIM34Q9BYJ4 488 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 PP2D1A8MPX8 630 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 MYO1CO00159 1063 aa19.64■□□□□ 0.73
SCARF1-205ENST00000571272 ATP1A1P05023 1023 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms