RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 MROH8Q9H579 483 aa22.2■■□□□ 1.14
CPNE7-209ENST00000568977 ZNF287Q9HBT7 754 aa22.2■■□□□ 1.14
CPNE7-209ENST00000568977 STRNO43815 780 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 PRDM1O75626 825 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 NCAPG2Q86XI2 1143 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 NAPBQ9H115 298 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 C11orf49Q9H6J7 331 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 NYAP2Q9P242 653 aa22.19■■□□□ 1.14
CPNE7-209ENST00000568977 IGKV6D-41A0A0C4DH26 115 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 CYP2C19P33261 490 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 FXR1P51114 621 aaKnown RBP eCLIP22.18■■□□□ 1.14
CPNE7-209ENST00000568977 TMEM132BQ14DG7 1078 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 LHX8Q68G74 356 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 DPP9Q86TI2 863 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 PPP1R9AQ9ULJ8 1098 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 ADAMTS5Q9UNA0 930 aa22.18■■□□□ 1.14
CPNE7-209ENST00000568977 PLIN4Q96Q06 1357 aa22.17■■□□□ 1.14
CPNE7-209ENST00000568977 PDE1AP54750 535 aa22.17■■□□□ 1.14
CPNE7-209ENST00000568977 ZNF444Q8N0Y2 327 aaPredicted RBP22.17■■□□□ 1.14
CPNE7-209ENST00000568977 ABRAQ8N0Z2 381 aa22.17■■□□□ 1.14
CPNE7-209ENST00000568977 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
CPNE7-209ENST00000568977 STAP2Q9UGK3 403 aa22.17■■□□□ 1.14
CPNE7-209ENST00000568977 ZNFX1Q9P2E3 1918 aaKnown RBP22.17■■□□□ 1.14
CPNE7-209ENST00000568977 PFASO15067 1338 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 NDUFB10O96000 172 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 IGHA2P01877 340 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 PPARAQ07869 468 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 OLFML2BQ68BL8 750 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 CCDC129Q6ZRS4 1044 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 EVI5LQ96CN4 794 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 CEP95Q96GE4 821 aa22.16■■□□□ 1.14
CPNE7-209ENST00000568977 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
CPNE7-209ENST00000568977 ZNF214Q9UL59 606 aaPredicted RBP22.16■■□□□ 1.14
CPNE7-209ENST00000568977 PLXNA1Q9UIW2 1896 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 F5H6K3 240 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 VWA5AO00534 786 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 FOXP2O15409 715 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 COBLO75128 1261 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 SLC25A27O95847 323 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 CYBAP13498 195 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 KLRC3Q07444 240 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 AAMPQ13685 434 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 RIOX2Q8IUF8 465 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 C7orf61Q8IZ16 206 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 REPS2Q8NFH8 660 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 CLIP2Q9UDT6 1046 aa22.15■■□□□ 1.14
CPNE7-209ENST00000568977 DDX20Q9UHI6 824 aaKnown RBP22.15■■□□□ 1.14
CPNE7-209ENST00000568977 MSCO60682 206 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 SLC3A2P08195 630 aaKnown RBP22.14■■□□□ 1.13
CPNE7-209ENST00000568977 COL6A1P12109 1028 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 FCER1AP12319 257 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 CNGA1P29973 690 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 PDE4BQ07343 736 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 LRRC47Q8N1G4 583 aaKnown RBP22.14■■□□□ 1.13
CPNE7-209ENST00000568977 TRPV1Q8NER1 839 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 SLF1Q9BQI6 1058 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 PRO3102Q9H379 93 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 MTMR4Q9NYA4 1195 aa22.14■■□□□ 1.13
CPNE7-209ENST00000568977 TSPY3P0CV98 308 aa22.13■■□□□ 1.13
CPNE7-209ENST00000568977 TSPY8P0CW00 308 aa22.13■■□□□ 1.13
CPNE7-209ENST00000568977 NEDD1Q8NHV4 660 aa22.13■■□□□ 1.13
CPNE7-209ENST00000568977 LNPKQ9C0E8 428 aa22.13■■□□□ 1.13
CPNE7-209ENST00000568977 SYNPO2Q9UMS6 1093 aa22.13■■□□□ 1.13
CPNE7-209ENST00000568977 TTLL1O95922 423 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 COPB2P35606 906 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 STAT3P40763 770 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 SMC5Q8IY18 1101 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 MAML3Q96JK9 1138 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 MMP19Q99542 508 aa22.12■■□□□ 1.13
CPNE7-209ENST00000568977 RANBP2P49792 3224 aaKnown RBP22.11■■□□□ 1.13
CPNE7-209ENST00000568977 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
CPNE7-209ENST00000568977 VPS53Q5VIR6 699 aa22.11■■□□□ 1.13
CPNE7-209ENST00000568977 MKL1Q969V6 931 aa22.11■■□□□ 1.13
CPNE7-209ENST00000568977 ZMYND8Q9ULU4 1186 aaPredicted RBP22.11■■□□□ 1.13
CPNE7-209ENST00000568977 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.11■■□□□ 1.13
CPNE7-209ENST00000568977 TFAP4Q01664 338 aa22.1■■□□□ 1.13
CPNE7-209ENST00000568977 KCTD2Q14681 263 aa22.1■■□□□ 1.13
CPNE7-209ENST00000568977 GMCL1P1Q8NEA9 526 aa22.1■■□□□ 1.13
CPNE7-209ENST00000568977 TEX13BQ9BXU2 312 aa22.1■■□□□ 1.13
CPNE7-209ENST00000568977 HELLSQ9NRZ9 838 aa22.1■■□□□ 1.13
CPNE7-209ENST00000568977 A0A0D9SFI3 127 aa22.09■■□□□ 1.13
CPNE7-209ENST00000568977 PGK2P07205 417 aa22.09■■□□□ 1.13
CPNE7-209ENST00000568977 CTDSPL2Q05D32 466 aa22.09■■□□□ 1.13
CPNE7-209ENST00000568977 SNRNP48Q6IEG0 339 aaKnown RBP22.09■■□□□ 1.13
CPNE7-209ENST00000568977 PRPF38AQ8NAV1 312 aaKnown RBP22.09■■□□□ 1.13
CPNE7-209ENST00000568977 FAM227BQ96M60 508 aa22.09■■□□□ 1.13
CPNE7-209ENST00000568977 RWDD1Q9H446 243 aaPredicted RBP22.09■■□□□ 1.13
CPNE7-209ENST00000568977 SEPT4O43236 478 aa22.08■■□□□ 1.13
CPNE7-209ENST00000568977 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
CPNE7-209ENST00000568977 KIFC2Q96AC6 838 aa22.08■■□□□ 1.13
CPNE7-209ENST00000568977 PCDH10Q9P2E7 1040 aa22.08■■□□□ 1.13
CPNE7-209ENST00000568977 DNM1LO00429 736 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 SYN1P17600 705 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 LRRC26Q2I0M4 334 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 PRAMEF19Q5SWL8 479 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 ANO1Q5XXA6 986 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 SLFN13Q68D06 897 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
CPNE7-209ENST00000568977 ANAPC4Q9UJX5 808 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms