RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
CLK3-224ENST00000568605 RAET1EQ8TD07 263 aa15.3■□□□□ 0.04
CLK3-224ENST00000568605 SLF1Q9BQI6 1058 aa15.3■□□□□ 0.04
CLK3-224ENST00000568605 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
CLK3-224ENST00000568605 IL17RBQ9NRM6 502 aa15.3■□□□□ 0.04
CLK3-224ENST00000568605 RBM8AQ9Y5S9 174 aaKnown RBP15.3■□□□□ 0.04
CLK3-224ENST00000568605 B4E1Z4 1266 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 NMT2O60551 498 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 KDM4AO75164 1064 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 BMP3P12645 472 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 DSG3P32926 999 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 RNF20Q5VTR2 975 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CLK3-224ENST00000568605 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 SOCS4Q8WXH5 440 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 TTC14Q96N46 770 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 CTDP1Q9Y5B0 961 aaPredicted RBP15.29■□□□□ 0.04
CLK3-224ENST00000568605 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
CLK3-224ENST00000568605 CYP21A2P08686 494 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 CTGFP29279 349 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 COPB2P35606 906 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 SLC1A4P43007 532 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 STAT2P52630 851 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 CAP1Q01518 475 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 PRKCZQ05513 592 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
CLK3-224ENST00000568605 PRPF38AQ8NAV1 312 aaKnown RBP15.28■□□□□ 0.04
CLK3-224ENST00000568605 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 ATG4CQ96DT6 458 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 NUP88Q99567 741 aaPredicted RBP15.28■□□□□ 0.04
CLK3-224ENST00000568605 FEM1BQ9UK73 627 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 TACC3Q9Y6A5 838 aa15.28■□□□□ 0.04
CLK3-224ENST00000568605 MCM3APO60318 1980 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 KIAA0100Q14667 2235 aaKnown RBP15.27■□□□□ 0.04
CLK3-224ENST00000568605 CCDC85CA6NKD9 419 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 FDX1P10109 184 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 NOVP48745 357 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.04
CLK3-224ENST00000568605 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 WDR78Q5VTH9 848 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 FAM160B2Q86V87 743 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 DGKHQ86XP1 1220 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 SLAIN1Q8ND83 568 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 SHCBP1Q8NEM2 672 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.04
CLK3-224ENST00000568605 SPATC1LQ9H0A9 340 aa15.27■□□□□ 0.04
CLK3-224ENST00000568605 SMCHD1A6NHR9 2005 aa15.27■□□□□ 0.03
CLK3-224ENST00000568605 TNKSO95271 1327 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 ERICH2A1L162 156 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 CNMDO75829 334 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 FLT3LGP49771 235 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 IRF5Q13568 498 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 PLS1Q14651 629 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 IFFO2Q5TF58 517 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 PLEKHH3Q7Z736 793 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
CLK3-224ENST00000568605 NUDT12Q9BQG2 462 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
CLK3-224ENST00000568605 E7EWF7 191 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 VWA5AO00534 786 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 CAPN15O75808 1086 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 REC8O95072 547 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 SLC25A27O95847 323 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 GRK4P32298 578 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 GPR142Q7Z601 462 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 ARMC5Q96C12 935 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 PORCNQ9H237 461 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 MROH8Q9H579 483 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 ZSWIM5Q9P217 1185 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 ADAMTS5Q9UNA0 930 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 MTMR7Q9Y216 660 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 LCTP09848 1927 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 HTTP42858 3142 aa15.25■□□□□ 0.03
CLK3-224ENST00000568605 TMEM232C9JQI7 657 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 PLA2G6O60733 806 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 ZBED4O75132 1171 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 MCCP23508 829 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 RGS2P41220 211 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 UBXN2AP68543 259 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 Q3C1V9 767 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
CLK3-224ENST00000568605 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
CLK3-224ENST00000568605 MOV10L1Q9BXT6 1211 aaKnown RBP15.24■□□□□ 0.03
CLK3-224ENST00000568605 TEX13BQ9BXU2 312 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms