RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ERCC5P28715 1186 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-214ENST00000567572 CFAP100Q494V2 611 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 PODNQ7Z5L7 613 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 CMTR1Q8N1G2 835 aaKnown RBP20.2■□□□□ 0.82
CMTM3-214ENST00000567572 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 ERO1AQ96HE7 468 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 PPP1R13BQ96KQ4 1090 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 PCDHB6Q9Y5E3 794 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 MYH1P12882 1939 aa20.2■□□□□ 0.82
CMTM3-214ENST00000567572 ACTN4O43707 911 aaKnown RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 TFAP4Q01664 338 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 NR5A1Q13285 461 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 PKN1Q16512 942 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 SMAP1Q8IYB5 467 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 ANKS1AQ92625 1134 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 PYM1Q9BRP8 204 aaKnown RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 PDGFDQ9GZP0 370 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 POLR2DO15514 142 aaKnown RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 C16orf86Q6ZW13 317 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 MXD3Q9BW11 206 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 L2HGDHQ9H9P8 463 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 IL17RBQ9NRM6 502 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 TCP11L1Q9NUJ3 509 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 TTF2Q9UNY4 1162 aaKnown RBP20.19■□□□□ 0.82
CMTM3-214ENST00000567572 ADAMTSL1Q8N6G6 1762 aa20.19■□□□□ 0.82
CMTM3-214ENST00000567572 MYH6P13533 1939 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
CMTM3-214ENST00000567572 ZNF18P17022 549 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 TRAPPC10P48553 1259 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 DEFB132Q7Z7B7 95 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 DGKHQ86XP1 1220 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 ZNF592Q92610 1267 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 MKNK2Q9HBH9 465 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 CABP5Q9NP86 173 aa20.18■□□□□ 0.82
CMTM3-214ENST00000567572 G3V3G9 751 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 PLEKHA8P1O95397 391 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 RASA1P20936 1047 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 BMP6P22004 513 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 PPP4R3BQ5MIZ7 849 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 ISM2Q6H9L7 571 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 DBNDD1Q9H9R9 158 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 FANCLQ9NW38 375 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 TRMT1Q9NXH9 659 aaKnown RBP20.17■□□□□ 0.82
CMTM3-214ENST00000567572 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 F8W031 263 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-214ENST00000567572 CCDC178Q5BJE1 867 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 HHIPL2Q6UWX4 724 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 OXER1Q8TDS5 423 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 PHLPP2Q6ZVD8 1323 aa20.17■□□□□ 0.82
CMTM3-214ENST00000567572 SCN9AQ15858 1988 aa20.16■□□□□ 0.82
CMTM3-214ENST00000567572 GOLGA6L9A6NEM1 432 aa20.16■□□□□ 0.82
CMTM3-214ENST00000567572 SLU7O95391 586 aaKnown RBP20.16■□□□□ 0.82
CMTM3-214ENST00000567572 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-214ENST00000567572 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
CMTM3-214ENST00000567572 ARHGAP6O43182 974 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 SLFN14P0C7P3 912 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 TSPY3P0CV98 308 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 TSPY8P0CW00 308 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 CDK8P49336 464 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
CMTM3-214ENST00000567572 TBX2Q13207 712 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-214ENST00000567572 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 CNTNAP5Q8WYK1 1306 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 ZSCAN12O43309 604 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 GRIN1Q05586 938 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 STRIP1Q5VSL9 837 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 ZNF444Q8N0Y2 327 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-214ENST00000567572 DPF2Q92785 391 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 KAT14Q9H8E8 782 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 KCNQ5Q9NR82 932 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 VPS54Q9P1Q0 977 aa20.15■□□□□ 0.82
CMTM3-214ENST00000567572 ECE2O60344 883 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-214ENST00000567572 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 GSDMAQ96QA5 445 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-214ENST00000567572 NFE2L3Q9Y4A8 694 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 USP17L3A6NCW0 530 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 USP17L4A6NCW7 530 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 FOXN1O15353 648 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 SCNN1DP51172 638 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 DACT2Q5SW24 774 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 USP17L1Q7RTZ2 530 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 SHISA4Q96DD7 197 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 TAOK2Q9UL54 1235 aa20.14■□□□□ 0.81
CMTM3-214ENST00000567572 PRR29P0C7W0 189 aa20.13■□□□□ 0.81
CMTM3-214ENST00000567572 KIF5BP33176 963 aa20.13■□□□□ 0.81
CMTM3-214ENST00000567572 ETF1P62495 437 aaKnown RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 ATP2C1P98194 919 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-214ENST00000567572 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms