RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MB21D1Q8N884 522 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 NUP88Q99567 741 aaPredicted RBP17.47■□□□□ 0.39
FANCA-220ENST00000566409 CWC22Q9HCG8 908 aaKnown RBP17.47■□□□□ 0.39
FANCA-220ENST00000566409 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 F5H6K3 240 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
FANCA-220ENST00000566409 KLRC3Q07444 240 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
FANCA-220ENST00000566409 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.39
FANCA-220ENST00000566409 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 DIS3LQ8TF46 1054 aaKnown RBP17.46■□□□□ 0.39
FANCA-220ENST00000566409 MKL1Q969V6 931 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 OSBPL3Q9H4L5 887 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 MTMR4Q9NYA4 1195 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
FANCA-220ENST00000566409 TRIOBPQ9H2D6 2365 aa17.46■□□□□ 0.39
FANCA-220ENST00000566409 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 H0YGN5 161 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 RAD21O60216 631 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 NDUFB10O96000 172 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
FANCA-220ENST00000566409 PLS1Q14651 629 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 REPS2Q8NFH8 660 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 IVNS1ABPQ9Y6Y0 642 aa17.45■□□□□ 0.38
FANCA-220ENST00000566409 FRMPD3Q5JV73 1810 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 VWA5AO00534 786 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 COBLO75128 1261 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 CAPN2P17655 700 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 ADORA2AP29274 412 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 TFAP4Q01664 338 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 PDE4BQ07343 736 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 ALX1Q15699 326 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 LHX8Q68G74 356 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
FANCA-220ENST00000566409 TICAM2Q86XR7 235 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
FANCA-220ENST00000566409 OGDHLQ9ULD0 1010 aa17.44■□□□□ 0.38
FANCA-220ENST00000566409 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 STRNO43815 780 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
FANCA-220ENST00000566409 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 DPF3Q92784 378 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 MROH8Q9H579 483 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
FANCA-220ENST00000566409 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
FANCA-220ENST00000566409 TTLL1O95922 423 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 FGAP02671 866 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 SLC3A2P08195 630 aaKnown RBP17.42■□□□□ 0.38
FANCA-220ENST00000566409 FGRP09769 529 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 HSPD1P10809 573 aaKnown RBP17.42■□□□□ 0.38
FANCA-220ENST00000566409 CYP2C19P33261 490 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 NCAPG2Q86XI2 1143 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 RIOX2Q8IUF8 465 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 LRRC47Q8N1G4 583 aaKnown RBP17.42■□□□□ 0.38
FANCA-220ENST00000566409 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 TRPV1Q8NER1 839 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
FANCA-220ENST00000566409 PLXNA1Q9UIW2 1896 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 NMT2O60551 498 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 SDSP20132 328 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 ABRAQ8N0Z2 381 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 HTATIP2Q9BUP3 242 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 SMCHD1A6NHR9 2005 aa17.41■□□□□ 0.38
FANCA-220ENST00000566409 SLC25A27O95847 323 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 PDE4AP27815 886 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 STAT3P40763 770 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 NECAB2Q7Z6G3 386 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 NBPF3Q9H094 633 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 SYNPO2Q9UMS6 1093 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
FANCA-220ENST00000566409 ORC4O43929 436 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 SLC34A2O95436 690 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 FCER1AP12319 257 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 CYBAP13498 195 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 OLFML2BQ68BL8 750 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 SLFN13Q68D06 897 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 PRPF38AQ8NAV1 312 aaKnown RBP17.39■□□□□ 0.37
FANCA-220ENST00000566409 COLQQ9Y215 455 aaPredicted RBP17.39■□□□□ 0.37
FANCA-220ENST00000566409 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
FANCA-220ENST00000566409 SZT2Q5T011 3432 aa17.38■□□□□ 0.37
FANCA-220ENST00000566409 PGK2P07205 417 aa17.38■□□□□ 0.37
FANCA-220ENST00000566409 NOVP48745 357 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms