RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CYP2C8P10632 490 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 PTGIRP43119 386 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 FLT3LGP49771 235 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 TRIM28Q13263 835 aaKnown RBP7.68□□□□□ -1.18
UBFD1-204ENST00000565634 GCKRQ14397 625 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 TMEM259Q4ZIN3 620 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 ALYREFQ86V81 257 aaKnown RBP7.68□□□□□ -1.18
UBFD1-204ENST00000565634 ANKRD18AQ8IVF6 992 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.68□□□□□ -1.18
UBFD1-204ENST00000565634 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
UBFD1-204ENST00000565634 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 TMEM39BQ9GZU3 492 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 MINPP1Q9UNW1 487 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 PTPRCP08575 1304 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 XDHP47989 1333 aa7.68□□□□□ -1.18
UBFD1-204ENST00000565634 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 CDC14CA4D256 554 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 PDHXO00330 501 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 IPO8O15397 1037 aaKnown RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 CCT4P50991 539 aaKnown RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 CACNB3P54284 484 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 PRMT2P55345 433 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 FOXO4P98177 505 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 LINS1Q8NG48 757 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 FOXD4L4Q8WXT5 416 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 SUCLG2Q96I99 432 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 NECAB3Q96P71 396 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 API5Q9BZZ5 524 aaKnown RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 SRCIN1Q9C0H9 1055 aa7.67□□□□□ -1.18
UBFD1-204ENST00000565634 TTYH1Q9H313 450 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 ZNF70Q9UC06 446 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-204ENST00000565634 MUC3AQ02505 3323 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 ARHGEF15O94989 841 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 DDX58O95786 925 aaKnown RBP7.66□□□□□ -1.18
UBFD1-204ENST00000565634 GNRH1P01148 92 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CETPP11597 493 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 TMCO4Q5TGY1 634 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 MIGA2Q7L4E1 593 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 SIRT2Q8IXJ6 389 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 ANKRD44Q8N8A2 993 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CCDC191Q8NCU4 936 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 ADAMTS19Q8TE59 1207 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 TEPSINQ96N21 525 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 COA1Q9GZY4 146 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CWC25Q9NXE8 425 aaPredicted RBP7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CSADQ9Y600 493 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 ZNF804BA4D1E1 1349 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 DNAH12Q6ZR08 3092 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 MYH3P11055 1940 aa7.66□□□□□ -1.18
UBFD1-204ENST00000565634 CARNS1A5YM72 827 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 WDHD1O75717 1129 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 ALDH1L1O75891 902 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 FOSL2P15408 326 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 PDE3AQ14432 1141 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 MVPQ14764 893 aaKnown RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 SHHQ15465 462 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 FAM109BQ6ICB4 259 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 ITPRIPQ8IWB1 547 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 TMEM151AQ8N4L1 468 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 KIF16BQ96L93 1317 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 C11orf49Q9H6J7 331 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 CD209Q9NNX6 404 aa7.65□□□□□ -1.18
UBFD1-204ENST00000565634 LRRFIP2Q9Y608 721 aaKnown RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-204ENST00000565634 UTYO14607 1347 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 MYO3BQ8WXR4 1341 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 GRM8O00222 908 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 MYO1BO43795 1136 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 TAF5LO75529 589 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 GDF11O95390 407 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 PCCAP05165 728 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 INPP5BP32019 993 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 FCGRTP55899 365 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 SNAPC2Q13487 334 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 CCDC85BQ15834 202 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 LRRC26Q2I0M4 334 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 CCDC152Q4G0S7 254 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 C9orf50Q5SZB4 431 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 PNMA1Q8ND90 353 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 KLHDC4Q8TBB5 520 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 ZNF594Q96JF6 807 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 CHMP4AQ9BY43 222 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 BICC1Q9H694 974 aaKnown RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 GREM2Q9H772 168 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 CYLDQ9NQC7 956 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 PAK6Q9NQU5 681 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 ZBTB40Q9NUA8 1239 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 C9orf78Q9NZ63 289 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-204ENST00000565634 MUC6Q6W4X9 2439 aa7.64□□□□□ -1.19
UBFD1-204ENST00000565634 MED23Q9ULK4 1368 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms