RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TRPV1Q8NER1 839 aa18.66■□□□□ 0.58
USB1-208ENST00000563207 MINDY4BA8MYZ0 360 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 COBLO75128 1261 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 FLOT1O75955 427 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 ERCC3P19447 782 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 RASA1P20936 1047 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 DSG3P32926 999 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 MFAP1P55081 439 aaKnown RBP18.65■□□□□ 0.58
USB1-208ENST00000563207 MCMDC2Q4G0Z9 681 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 GIMAP6Q6P9H5 292 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 ANKLE1Q8NAG6 615 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 SPATC1LQ9H0A9 340 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 ARHGEF10LQ9HCE6 1279 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 HOXC10Q9NYD6 342 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 ZMYND8Q9ULU4 1186 aaPredicted RBP18.65■□□□□ 0.58
USB1-208ENST00000563207 NR2E3Q9Y5X4 410 aa18.65■□□□□ 0.58
USB1-208ENST00000563207 GPAA1O43292 621 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 IGHA2P01877 340 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 SYN1P17600 705 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 PLS1Q14651 629 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.57
USB1-208ENST00000563207 NBPF3Q9H094 633 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 C11orf49Q9H6J7 331 aa18.64■□□□□ 0.57
USB1-208ENST00000563207 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.57
USB1-208ENST00000563207 RAD21O60216 631 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 PRDM1O75626 825 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 HOXC6P09630 235 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 ADORA2AP29274 412 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 TMEM132BQ14DG7 1078 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 SBK1Q52WX2 424 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 TRMT44Q8IYL2 757 aaKnown RBP18.63■□□□□ 0.57
USB1-208ENST00000563207 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 LPAR1Q92633 364 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
USB1-208ENST00000563207 IVNS1ABPQ9Y6Y0 642 aa18.63■□□□□ 0.57
USB1-208ENST00000563207 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
USB1-208ENST00000563207 COL6A1P12109 1028 aa18.62■□□□□ 0.57
USB1-208ENST00000563207 NMIQ13287 307 aaPredicted RBP18.62■□□□□ 0.57
USB1-208ENST00000563207 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
USB1-208ENST00000563207 FAM83BQ5T0W9 1011 aa18.62■□□□□ 0.57
USB1-208ENST00000563207 ANO1Q5XXA6 986 aa18.62■□□□□ 0.57
USB1-208ENST00000563207 ZNF236Q9UL36 1845 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 WDR46O15213 610 aaKnown RBP18.61■□□□□ 0.57
USB1-208ENST00000563207 CNGA1P29973 690 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 DPP9Q86TI2 863 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 ADAMTS5Q9UNA0 930 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
USB1-208ENST00000563207 RAD50Q92878 1312 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
USB1-208ENST00000563207 APPP05067 770 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 LRRC26Q2I0M4 334 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 MFSD14CQ5VZR4 134 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
USB1-208ENST00000563207 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 SKAP1Q86WV1 359 aa18.6■□□□□ 0.57
USB1-208ENST00000563207 ROBO3Q96MS0 1386 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 FOXP2O15409 715 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 PGK2P07205 417 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 CYBAP13498 195 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 CAPN2P17655 700 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 CHMLP26374 656 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 TDO2P48775 406 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 IFNL3Q8IZI9 196 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 SHCBP1Q8NEM2 672 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 REPS2Q8NFH8 660 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 CHMP4CQ96CF2 233 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 SH2D4AQ9H788 454 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 MKNK2Q9HBH9 465 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
USB1-208ENST00000563207 DDX20Q9UHI6 824 aaKnown RBP18.59■□□□□ 0.57
USB1-208ENST00000563207 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.57
USB1-208ENST00000563207 IGKV6D-41A0A0C4DH26 115 aa18.58■□□□□ 0.56
USB1-208ENST00000563207 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.56
USB1-208ENST00000563207 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
USB1-208ENST00000563207 TACC3Q9Y6A5 838 aa18.58■□□□□ 0.56
USB1-208ENST00000563207 LAMA3Q16787 3333 aa18.58■□□□□ 0.56
USB1-208ENST00000563207 PLXNA1Q9UIW2 1896 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 F5H6K3 240 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 VWA5AO00534 786 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 STRNO43815 780 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 NDUFB10O96000 172 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 KLRC3Q07444 240 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 ALX1Q15699 326 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 FAM47AQ5JRC9 791 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 CASC1Q6TDU7 716 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 MB21D1Q8N884 522 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 GDF15Q99988 308 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 MROH8Q9H579 483 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 GOPCQ9HD26 462 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
USB1-208ENST00000563207 RIPK3Q9Y572 518 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms