RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 RASSF8Q8NHQ8 419 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SMARCC2Q8TAQ2 1214 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SUN5Q8TC36 379 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 AFAP1L1Q8TED9 768 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 GIPC2Q8TF65 315 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CDHR1Q96JP9 859 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 C1orf74Q96LT6 269 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 ZNF570Q96NI8 536 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NEUROD6Q96NK8 337 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 TRAPPC9Q96Q05 1148 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CTAGE1Q96RT6 745 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NUP58Q9BVL2 599 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 VPS33BQ9H267 617 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 DMAP1Q9NPF5 467 aaPredicted RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 STIM2Q9P246 746 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 HOOK1Q9UJC3 728 aaKnown RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.52□□□□□ -1.53
TCF4-215ENST00000562638 LZTS1Q9Y250 596 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SLC45A1Q9Y2W3 748 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 PCDHGB3Q9Y5G1 929 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SLC4A7Q9Y6M7 1214 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CLTCL1P53675 1640 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 GRIN2DO15399 1336 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CDHR2Q9BYE9 1310 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SETD1BQ9UPS6 1966 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 YTHDC2Q9H6S0 1430 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 AK9Q5TCS8 1911 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LINC00854A0A1B0GVQ3 168 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LRRIQ3A6PVS8 624 aaPredicted RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 LDHAP00338 332 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 TUBBP07437 444 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 UBL4AP11441 157 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 TCF3P15923 654 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 VARSP26640 1264 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 WEE1P30291 646 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 MAN1A1P33908 653 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 KRT9P35527 623 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 MLH1P40692 756 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CCT5P48643 541 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CTCFP49711 727 aaPredicted RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 MCM2P49736 904 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 GEMIN4P57678 1058 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 TUBB4BP68371 445 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 GPSM2P81274 684 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LMNB2Q03252 620 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 PSME1Q06323 249 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 DMPKQ09013 629 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 XRCC4Q13426 336 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 TRIM29Q14134 588 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SAFBQ15424 915 aaKnown RBP eCLIP5.51□□□□□ -1.53
TCF4-215ENST00000562638 WHAMMP3Q1A5X7 153 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 MAP7D1Q3KQU3 841 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CCDC153Q494R4 210 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 PCNX4Q63HM2 1172 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CCDC174Q6PII3 467 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SLC2A7Q6PXP3 512 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SARM1Q6SZW1 724 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 C6orf89Q6UWU4 347 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 GIGYF2Q6Y7W6 1299 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 GRAMD2AQ8IUY3 354 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LRRC8AQ8IWT6 810 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CCDC13Q8IYE1 715 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 KIRREL3Q8IZU9 778 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 MSANTD4Q8NCY6 345 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 NGDNQ8NEJ9 315 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 RBM46Q8TBY0 533 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 NSMCE1Q8WV22 266 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 DPF3Q92784 378 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SDCCAG3Q96C92 435 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 UROC1Q96N76 676 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 ZMAT2Q96NC0 199 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 NR1H4Q96RI1 486 aaPredicted RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 SETDB2Q96T68 719 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 TCF12Q99081 682 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 BPIFA3Q9BQP9 254 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 DCTPP1Q9H773 170 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 PARVGQ9HBI0 331 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 ANO10Q9NW15 660 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 CABP1Q9NZU7 370 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 SEPT10Q9P0V9 454 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 STK39Q9UEW8 545 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 TPCN1Q9ULQ1 816 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 LUC7L2Q9Y383 392 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 TOP2BQ02880 1626 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 PTPN23Q9H3S7 1636 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 NKTRP30414 1462 aaKnown RBP5.51□□□□□ -1.53
TCF4-215ENST00000562638 TEX14Q8IWB6 1497 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 IFT140Q96RY7 1462 aa5.51□□□□□ -1.53
TCF4-215ENST00000562638 TIAM1Q13009 1591 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 IQCA1LA6NCM1 817 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 EIF3HO15372 352 aaKnown RBP eCLIP5.5□□□□□ -1.53
TCF4-215ENST00000562638 PPP1R12BO60237 982 aaPredicted RBP5.5□□□□□ -1.53
TCF4-215ENST00000562638 DIAPH2O60879 1101 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 SMIM24O75264 130 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 RAPGEF3O95398 923 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 PDHBP11177 359 aa5.5□□□□□ -1.53
TCF4-215ENST00000562638 ALADP13716 330 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms