RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RANBP6O60518 1105 aaKnown RBP14.79□□□□□ -0.04
SLIRP-211ENST00000557623 TTLL1O95922 423 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 NT5C2P49902 561 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 HAND2P61296 217 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 IMMTQ16891 758 aaKnown RBP14.79□□□□□ -0.04
SLIRP-211ENST00000557623 BMP2KLQ5H9B9 411 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 FAM47AQ5JRC9 791 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 DOCK3Q8IZD9 2030 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 MKL1Q969V6 931 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 CEP95Q96GE4 821 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 TANGO6Q9C0B7 1094 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 TOMM22Q9NS69 142 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 MTMR4Q9NYA4 1195 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 HOXC10Q9NYD6 342 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 HPS5Q9UPZ3 1129 aa14.79□□□□□ -0.04
SLIRP-211ENST00000557623 CAP1Q01518 475 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 COG2Q14746 738 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 GPRC5AQ8NFJ5 357 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
SLIRP-211ENST00000557623 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
SLIRP-211ENST00000557623 MYPNQ86TC9 1320 aa14.77□□□□□ -0.04
SLIRP-211ENST00000557623 TNPO2O14787 897 aaKnown RBP14.77□□□□□ -0.05
SLIRP-211ENST00000557623 SGSM2O43147 1006 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 RAD21O60216 631 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 CTGFP29279 349 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
SLIRP-211ENST00000557623 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 COA7Q96BR5 231 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 INCENPQ9NQS7 918 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 SRRDQ9UH36 339 aa14.77□□□□□ -0.05
SLIRP-211ENST00000557623 CCDC85CA6NKD9 419 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-211ENST00000557623 F5H6K3 240 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 FLOT1O75955 427 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 ERVK-24P63145 666 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 CCNA1P78396 465 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 KLRC3Q07444 240 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
SLIRP-211ENST00000557623 EFCAB3Q8N7B9 438 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 ESR2Q92731 530 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 IL25Q9H293 177 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
SLIRP-211ENST00000557623 MAPK4P31152 587 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-211ENST00000557623 CASC1Q6TDU7 716 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 NBPF11Q86T75 865 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 TBC1D10CQ8IV04 446 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 GMCL1P1Q8NEA9 526 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 RAET1EQ8TD07 263 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 NBPF3Q9H094 633 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 OCEL1Q9H607 264 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 TXNRD2Q9NNW7 524 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 PTCH2Q9Y6C5 1203 aa14.75□□□□□ -0.05
SLIRP-211ENST00000557623 PLXNB2O15031 1838 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 NDUFB10O96000 172 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 NOVP48745 357 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 SLC9C1Q4G0N8 1177 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 CCDC178Q5BJE1 867 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 FAM83BQ5T0W9 1011 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
SLIRP-211ENST00000557623 KRT23Q9C075 422 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 IL17RBQ9NRM6 502 aa14.74□□□□□ -0.05
SLIRP-211ENST00000557623 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
SLIRP-211ENST00000557623 CNMDO75829 334 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 PTH1RQ03431 593 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 PRKCZQ05513 592 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 Q3C1V9 767 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 SLFN13Q68D06 897 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 LHX8Q68G74 356 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 IQCA1Q86XH1 822 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 TTC14Q96N46 770 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 ESYT1Q9BSJ8 1104 aa14.73□□□□□ -0.05
SLIRP-211ENST00000557623 CWC22Q9HCG8 908 aaKnown RBP14.73□□□□□ -0.05
SLIRP-211ENST00000557623 RBBP6Q7Z6E9 1792 aaKnown RBP14.73□□□□□ -0.05
SLIRP-211ENST00000557623 NEDD4P46934 1319 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 NMT2O60551 498 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
SLIRP-211ENST00000557623 FLT3LGP49771 235 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 TRDNQ13061 729 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 IRF5Q13568 498 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SLIRP-211ENST00000557623 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms