RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 COBLO75128 1261 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 TMEM132BQ14DG7 1078 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 LRRC26Q2I0M4 334 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 LRIT3Q3SXY7 679 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 TRPV1Q8NER1 839 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 ROBO3Q96MS0 1386 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 SENP6Q9GZR1 1112 aaPredicted RBP13.77□□□□□ -0.21
LRP1-209ENST00000555941 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 NYAP2Q9P242 653 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 ZNFX1Q9P2E3 1918 aaKnown RBP13.77□□□□□ -0.21
LRP1-209ENST00000555941 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
LRP1-209ENST00000555941 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
LRP1-209ENST00000555941 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 VWA5AO00534 786 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 ERC2O15083 957 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 SYN1P17600 705 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 STAT3P40763 770 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 TDHQ8IZJ6 230 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
LRP1-209ENST00000555941 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.76□□□□□ -0.21
LRP1-209ENST00000555941 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
LRP1-209ENST00000555941 GREB1LQ9C091 1923 aaPredicted RBP13.76□□□□□ -0.21
LRP1-209ENST00000555941 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
LRP1-209ENST00000555941 GPAA1O43292 621 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 RASA1P20936 1047 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 KCTD2Q14681 263 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 MMP19Q99542 508 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 DNAH12Q6ZR08 3092 aa13.75□□□□□ -0.21
LRP1-209ENST00000555941 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 PATL2C9JE40 543 aaKnown RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 KBTBD13C9JR72 458 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 F5H6K3 240 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 TDO2P48775 406 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 KLRC3Q07444 240 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 MKL1Q969V6 931 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 LBHD1Q9BQE6 289 aaPredicted RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 FBXO28Q9NVF7 368 aa13.74□□□□□ -0.21
LRP1-209ENST00000555941 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
LRP1-209ENST00000555941 IGKV6D-41A0A0C4DH26 115 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 ATP2A1O14983 1001 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 RAD21O60216 631 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 APPP05067 770 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
LRP1-209ENST00000555941 ZNF792Q3KQV3 632 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 MSL3Q8N5Y2 521 aaKnown RBP13.73□□□□□ -0.21
LRP1-209ENST00000555941 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 TINF2Q9BSI4 451 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
LRP1-209ENST00000555941 PLXNA1Q9UIW2 1896 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 NDUFB10O96000 172 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 PDE4BQ07343 736 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
LRP1-209ENST00000555941 C1orf53Q5VUE5 145 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 IFNL3Q8IZI9 196 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 CLIP2Q9UDT6 1046 aa13.72□□□□□ -0.21
LRP1-209ENST00000555941 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 M0R2C6 588 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 ZBED4O75132 1171 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 TTLL1O95922 423 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 FDX1P10109 184 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 RARBP10826 455 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
LRP1-209ENST00000555941 RTP1P59025 263 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 SNX17Q15036 470 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
LRP1-209ENST00000555941 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 EPB41L4AQ9HCS5 686 aaPredicted RBP13.71□□□□□ -0.21
LRP1-209ENST00000555941 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.21
LRP1-209ENST00000555941 LAMA3Q16787 3333 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 SMCHD1A6NHR9 2005 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 PGK2P07205 417 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 MX1P20591 662 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 OAZ1P54368 228 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 MDM2Q00987 491 aaPredicted RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 LRRC41Q15345 812 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 RNF180Q86T96 592 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms